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Gene: Yod1 (YOD1 deubiquitinase) Rattus norvegicus
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Symbol: Yod1
Name: YOD1 deubiquitinase
Description: Predicted to have Lys48-specific deubiquitinase activity; thiol-dependent ubiquitin-specific protease activity; and ubiquitin protein ligase binding activity. Predicted to be involved in several processes, including endoplasmic reticulum unfolded protein response; protein deubiquitination; and ubiquitin-dependent ERAD pathway. Predicted to localize to the cytosol. Orthologous to human YOD1 (YOD1 deubiquitinase); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; INTERACTS WITH (+)-schisandrin B; bisphenol A; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: HIV-induced protein-7-like protease; hshin7; MGC124915; ubiquitin thioesterase OTU1; YOD1 OTU deubiquinating enzyme 1 homolog; YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae); YOD1 OTU deubiquitinating enzyme 1 homologue; YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)
Orthologs:
Homo sapiens (human) : YOD1 (YOD1 deubiquitinase)  HGNC  Alliance
Mus musculus (house mouse) : Yod1 (YOD1 deubiquitinase)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : YOD1 (YOD1 deubiquitinase)
Canis lupus familiaris (dog) : YOD1 (YOD1 deubiquitinase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Yod1 (YOD1 deubiquitinase)
Sus scrofa (pig) : YOD1 (YOD1 deubiquitinase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01347,441,296 - 47,443,013 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01352,529,960 - 52,531,677 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41343,653,274 - 43,654,991 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11343,667,316 - 43,669,034 (+)NCBI
Celera1342,526,067 - 42,527,784 (+)NCBICelera
Cytogenetic Map13q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Yod1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1359726
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.