| Gene: FUT1 (fucosyltransferase 1 (H blood group)) Sus scrofa |
|
Analyze |
| Symbol: |
FUT1 |
| Name: |
fucosyltransferase 1 (H blood group) |
| Description: |
PARTICIPATES IN globoside metabolic pathway; lacto-series glycosphingolipid metabolic pathway |
| Type: |
protein-coding
|
| RefSeq Status: |
PROVISIONAL |
| Also known as: |
alpha(1,2)FT 1; alpha-1,2-fucosyltransferase; alpha-1-fucosyltransferase; galactoside 2-alpha-L-fucosyltransferase 1; GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 1 |
| Orthologs: |
|
| Latest Assembly: |
Sscrofa11.1 - Pig Sscrofa11.1 Assembly |
| Position: |
|
| JBrowse: |
View Region in Genome Browser (JBrowse)
|
| Model |
|
 Molecular Pathway Annotations |
Molecular Pathway Annotations
References - uncurated
Genomics
Comparative Map Data
FUT1
(Sus scrofa - pig) |
|
FUT1
(Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 19 | 48,748,011 - 48,755,390 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh37 | 19 | 49,251,268 - 49,258,647 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 19 | 53,943,080 - 53,950,459 (-) | NCBI | NCBI36 | | hg18 | NCBI36 | Build 34 | 19 | 53,943,081 - 53,950,459 | NCBI | | | | | Celera | 19 | 46,117,360 - 46,124,739 (-) | NCBI | | | | | Cytogenetic Map | 19 | q13.33 | NCBI | | | | | HuRef | 19 | 45,630,081 - 45,637,494 (-) | NCBI | | HuRef | | | CHM1_1 | 19 | 49,253,039 - 49,260,418 (-) | NCBI | | CHM1_1 | | |
|
Fut1
(Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm38 | 7 | 45,617,606 - 45,621,059 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | MGSCv37 | 7 | 52,872,976 - 52,876,427 (+) | NCBI | GRCm37 | | mm9 | NCBIm37 | MGSCv36 | 7 | 45,485,648 - 45,489,101 (+) | NCBI | | | mm8 | | Celera | 7 | 41,079,136 - 41,082,599 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | B3 | NCBI | | | | | cM Map | 7 | 29.39 | NCBI | | | | |
|
Fut1
(Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Rnor_6.0 | 1 | 101,599,018 - 101,602,440 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 101,599,018 - 101,602,436 (+) | Ensembl | | | | | Rnor_5.0 | 1 | 102,677,798 - 102,681,216 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 96,085,914 - 96,089,332 (+) | NCBI | RGSC3.4 | | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 96,164,024 - 96,167,443 (+) | NCBI | | | | | Celera | 1 | 90,340,591 - 90,344,009 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q22 | NCBI | | | | |
|
Fut1
(Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 | NW_004955559 | 1,822,412 - 1,824,184 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
FUT1
(Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
PanPan1.1 | 19 | 54,338,640 - 54,344,491 (-) | NCBI | panpan1.1 | PanPan1.1 | | | Bonobo Cytomap | 19 | | NCBI | | | | |
|
FUT1
(Canis lupus familiaris - dog) |
|
Fut1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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Expression
Sequence
Nucleotide Sequences
Reference Sequences
| RefSeq Acc Id: |
NM_214068 ⟹ NP_999233 |
| RefSeq Status: |
PROVISIONAL
|
| Type: |
CODING
|
| Position: |
| Pig Assembly | Chr | Position (strand) | Source |
|---|
Sscrofa11.1 | 6 | 54,077,431 - 54,080,475 (-) | NCBI | |
|
| Sequence: |
GATGCGGGCTGCACTTATGACTGGGAATCTGCCACCCGCCAGGAGCTCAGCCATGTGGGTCCCC
AGCCGCCGCCACCTCTGTCTGACCTTCCTGCTAGTCTGTGTTTTAGCAGCAATTTTCTTCCTGA
ACGTCTATCAAGACCTCTTTTACAGTGGCTTAGACCTGCTGGCCCTGTGTCCAGACCATAACGT
GGTATCATCTCCCGTGGCCATATTCTGCCTGGCGGGCACGCCGGTACACCCCAACGCCTCCGAT
TCCTGTCCCAAGCATCCTGCCTCCCTTTCCGGGACCTGGACTATTTACCCGGATGGCCGGTTTG
GGAACCAGATGGGACAGTATGCCACGCTGCTGGCCCTGGCGCAGCTCAACGGCCGCCAGGCCTT
CATCCAGCCTGCCATGCACGCCGTCCTGGCCCCCGTGTTCCGCATCACGCTGCCTGTCCTGGCG
CCCGAGGTAGACAGGCACGCTCCTTGGCGGGAGCTGGAGCTTCACGACTGGATGTCCGAGGATT
ATGCCCACTTAAAGGAGCCCTGGCTGAAGCTCACCGGCTTCCCCTGCTCCTGGACCTTCTTCCA
CCACCTCCGGGAGCAGATCCGCAGCGAGTTCACCCTGCACGACCACCTTCGGCAAGAGGCCCAG
GGGGTACTGAGTCAGTTCCGTCTACCCCGCACAGGGGACCGCCCCAGCACCTTCGTGGGGGTCC
ACGTGCGCCGCGGGGACTATCTGCGTGTGATGCCCAAGCGCTGGAAGGGGGTGGTGGGTGATGG
CGCTTACCTCCAGCAGGCTATGGACTGGTTCCGGGCCCGATACGAAGCCCCCGTCTTTGTGGTC
ACCAGCAACGGCATGGAGTGGTGCCGGAAGAACATCGACACCTCCCGGGGGGACGTGATCTTTG
CTGGCGATGGGCGGGAGGCCGCGCCCGCCAGGGACTTTGCGCTGCTGGTGCAGTGCAACCACAC
CATCATGACCATTGGCACCTTCGGCTTCTGGGCCGCCTACCTGGCTGGTGGAGATACCATCTAC
TTGGCTAACTTCACCCTGCCCACTTCCAGCTTCCTGAAGATCTTTAAACCCGAGGCTGCCTTCC
TGCCCGAGTGGGTGGGCATTAATGCAGACTTGTCTCCACTCCAGATGTTGGCTGGGCCTTGAAC
CAGCCAGGAGCCTTTCTGGAATAGCCTCGGTCAACCCAGGGCCAGCGTTATGGGTCTCCGGAAG
CCCCAGTAACTTCCGGAGATGCTGGTGGTCCTGTAGCAGCTGGACACTTATTTCAAGAGTGATT
CTAATTGGCTGGACTCAGAGGAAACCCTGCAGAAGGGCTTGCTGCAAGGGTTGGAACATTCTAG
AACCAGTGGAAGAGCTTTTCATGATGGCTGGCAATGTCTGGAGACGCTTAATGCCATTCTAGAC
CTCGCATTGCCCACCTGTTCTTCCCAGCCCGTGTCCAGAGTACTTCTAGAGGGCTGTCTGCCCC
CTTCCCCAGGGAACTCCTTGCTCCAGTGTTGACTGTCTAGAAGAGATATTTCTCCTCCCCCTGG
GGTGTCAGAACTGAAGGACCTCTTGGAGGTTGTGGGGCAAGCACTCACCAACCCCCCCACCTCT
GTTTCTCCAAGGGCTCTGGGGGAAGGTTTGCTCTAGAGAGGGTCAGTGGTAGGGTCTGTAAAGA
ACCCTTCTGGCCCCTTCCAGAGGGGAGGGGATTCTGGAATTCTCGATAACCTCCGCCAAGAAGC
CGATGAGGGTACAACCAGAAGCTCACCACCTCACCACTGCTAGAAAGGTTGATGGAAGACAAAC
TACCTGTGTAGCTGGGGTGGTTTGGGAGCAGGGCGGAACTTTCCCCAACCTTCCATCCCCCAGA
AAACCACAAACCATAGATATACTAAAATATGGGAGGAGGAGGAAAAGGATGGATGCTGAATGGT
GCAGGTTATGGAGCAAGGCTCTGCAGAAATCTAGGGACAACTTTTTTTTTTTTTTTTTTAAGCC
CCCAAACTGCCAACGGTAGGTAGATGTGCATATGTTGGCTCTGAGTTCATTTCCTCTCCCACTG
AAGGATATTTCCTCCTTGGCAGCTGGGCTGCTGAGGCTGATGGGGTCGATTTACCAAACGCCAC
TTGGCATAAGGGTGCCCATTGCAGAGACCCGCCCATATCGTGCCTCTTGCTAACCCCTATCTGC
CCCGAATCCACACGACCATGAAATCTGGCTTTGAACAAGCCAGGAATGGAAGGCTCTGAAGGTA
TGTAGCCCATGGCCTGGCCTCCAACCCAGGCAGGAGCACAGGGTCTGGCCAAAGAGGATGGGAC
ATTTGACTCAGGTTTTAGGATCCTCCTGATGCGTTTTGAAGGGAGTGAAGGCAGATGCTTTTAT
GATAGAGTTGTCTGAGAATCTAAGCCCTCTTCTAGTCTTCTCAGGGAATTTGTGGGCACCGGTC
CCTACTCAGTTGCCCTTGGTGGGAGAGAGGGAAGTATGAATTAAAAGTCCACATCACC
hide sequence
|
Protein Sequences
Reference Sequences
| RefSeq Acc Id: |
NP_999233 ⟸ NM_214068 |
| - UniProtKB: |
Q29043 (UniProtKB/Swiss-Prot) |
| - Sequence: |
MWVPSRRHLCLTFLLVCVLAAIFFLNVYQDLFYSGLDLLALCPDHNVVSSPVAIFCLAGTPVHP
NASDSCPKHPASLSGTWTIYPDGRFGNQMGQYATLLALAQLNGRQAFIQPAMHAVLAPVFRITL
PVLAPEVDRHAPWRELELHDWMSEDYAHLKEPWLKLTGFPCSWTFFHHLREQIRSEFTLHDHLR
QEAQGVLSQFRLPRTGDRPSTFVGVHVRRGDYLRVMPKRWKGVVGDGAYLQQAMDWFRARYEAP
VFVVTSNGMEWCRKNIDTSRGDVIFAGDGREAAPARDFALLVQCNHTIMTIGTFGFWAAYLAGG
DTIYLANFTLPTSSFLKIFKPEAAFLPEWVGINADLSPLQMLAGP
hide sequence
|
Additional Information
External Database Links |
|
| CRRD Object Information |
| CRRD ID: |
13845397 |
| Created: |
2019-01-29 |
| Species: |
Sus scrofa |
| Last Modified: |
2019-11-27 |
| Status: |
ACTIVE |
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