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Gene: KDM5C (lysine demethylase 5C) Sus scrofa
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Symbol: KDM5C
Name: lysine demethylase 5C
CRRD ID: 13974679
Description: ENCODES a protein that exhibits histone demethylase activity (H3-K4 specific) (ortholog); INVOLVED IN histone H3-K4 demethylation (ortholog); response to toxic substance (ortholog); PARTICIPATES IN histone modification pathway; renal cell carcinoma pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); autistic disorder (ortholog); breast cancer (ortholog); FOUND IN cytosol (inferred); nucleoplasm (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: [histone H3]-trimethyl-L-lysine(4) demethylase 5C; histone demethylase JARID1C; JARID1C; jumonji, AT rich interactive domain 1C; jumonji/ARID domain-containing protein 1C; lysine (K)-specific demethylase 5C tv1; lysine-specific demethylase 5C; protein SmcX; SMCX
Orthologs:
Homo sapiens (human) : KDM5C (lysine demethylase 5C)  HGNC  Alliance
Mus musculus (house mouse) : Kdm5c (lysine (K)-specific demethylase 5C)  MGI  Alliance
Rattus norvegicus (Norway rat) : Kdm5c (lysine demethylase 5C)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Kdm5c (lysine demethylase 5C)
Pan paniscus (bonobo/pygmy chimpanzee) : KDM5C (lysine demethylase 5C)
Canis lupus familiaris (dog) : KDM5C (lysine demethylase 5C)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Kdm5c (lysine demethylase 5C)
Chlorocebus sabaeus (African green monkey) : KDM5C (lysine demethylase 5C)
Heterocephalus glaber (naked mole-rat) : Kdm5c (lysine demethylase 5C)
more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX45,968,814 - 46,003,215 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X45,968,812 - 46,003,215 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X51,468,791 - 51,503,194 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - uncurated

Genomics

Comparative Map Data

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
 
More on KDM5C
NCBI Gene
Ensembl Gene
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 13974679
Created: 2019-01-29
Species: Sus scrofa
Last Modified: 2020-07-28
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.