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Gene: DEAF1 (DEAF1 transcription factor) Sus scrofa
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Symbol: DEAF1
Name: DEAF1 transcription factor
Description: ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (inferred); RNA polymerase II transcription regulatory region sequence-specific DNA binding (inferred); INVOLVED IN negative regulation of transcription, DNA-templated (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); Dyskinesias, Seizures, and Intellectual Developmental Disorder (ortholog); FOUND IN cytoplasm (ortholog); RNA polymerase II transcription regulator complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: deformed epidermal autoregulatory factor 1; deformed epidermal autoregulatory factor 1 homolog
Orthologs:
Homo sapiens (human) : DEAF1 (DEAF1 transcription factor)  HGNC  Alliance
Mus musculus (house mouse) : Deaf1 (DEAF1, transcription factor)  MGI  Alliance
Rattus norvegicus (Norway rat) : Deaf1 (DEAF1 transcription factor)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Deaf1 (DEAF1 transcription factor)
Pan paniscus (bonobo/pygmy chimpanzee) : DEAF1 (DEAF1 transcription factor)
Canis lupus familiaris (dog) : DEAF1 (DEAF1 transcription factor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Deaf1 (DEAF1 transcription factor)
Chlorocebus sabaeus (African green monkey) : DEAF1 (DEAF1 transcription factor)
Heterocephalus glaber (naked mole-rat) : Deaf1 (DEAF1 transcription factor)
more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2404,532 - 427,542 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12404,514 - 427,584 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22246,503 - 269,570 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene Ontology Annotations
References - uncurated

Genomics

Comparative Map Data

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
 
More on DEAF1
NCBI Gene
Ensembl Gene
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 13996679
Created: 2019-01-29
Species: Sus scrofa
Last Modified: 2020-07-01
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.