Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: CLN5 (CLN5 intracellular trafficking protein) Sus scrofa
Analyze
Symbol: CLN5
Name: CLN5 intracellular trafficking protein
CRRD ID: 14012617
Description: ENCODES a protein that exhibits mannose binding (ortholog); INVOLVED IN brain development (ortholog); glycosylation (ortholog); lysosomal lumen acidification (ortholog); ASSOCIATED WITH Chromosome 13q Deletion Syndrome (ortholog); chromosome 13q14 deletion syndrome (ortholog); epilepsy (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); integral component of membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: ceroid-lipofuscinosis neuronal protein 5; ceroid-lipofuscinosis, neuronal 5
Orthologs:
Homo sapiens (human) : CLN5 (CLN5 intracellular trafficking protein)  HGNC  Alliance
Mus musculus (house mouse) : Cln5 (ceroid-lipofuscinosis, neuronal 5)  MGI  Alliance
Rattus norvegicus (Norway rat) : Cln5 (CLN5, intracellular trafficking protein)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cln5 (CLN5 intracellular trafficking protein)
Pan paniscus (bonobo/pygmy chimpanzee) : CLN5 (CLN5 intracellular trafficking protein)
Canis lupus familiaris (dog) : CLN5 (CLN5 intracellular trafficking protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cln5 (CLN5 intracellular trafficking protein)
Chlorocebus sabaeus (African green monkey) : CLN5 (CLN5 intracellular trafficking protein)
Heterocephalus glaber (naked mole-rat) : Cln5 (CLN5 intracellular trafficking protein)
more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11149,105,822 - 49,128,425 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21153,744,011 - 53,766,580 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - uncurated

Genomics

Comparative Map Data

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
 
More on CLN5
NCBI Gene
Ensembl Gene
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 14012617
Created: 2019-01-29
Species: Sus scrofa
Last Modified: 2020-07-14
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.