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Gene: ATG16L1 (autophagy related 16 like 1) Sus scrofa
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Symbol: ATG16L1
Name: autophagy related 16 like 1
Description: INVOLVED IN cerebellar cortex development (inferred); corpus callosum development (inferred); hippocampus development (inferred); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Cardiomegaly (ortholog); Crohn's disease (ortholog); inflammatory bowel disease (ortholog); FOUND IN axoneme (inferred)
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATG16 autophagy related 16-like 1; autophagy-related protein 16-1
Orthologs:
Homo sapiens (human) : ATG16L1 (autophagy related 16 like 1)  HGNC  Alliance
Mus musculus (house mouse) : Atg16l1 (autophagy related 16-like 1 (S. cerevisiae))  MGI  Alliance
Rattus norvegicus (Norway rat) : Atg16l1 (autophagy related 16-like 1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atg16l1 (autophagy related 16 like 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ATG16L1 (autophagy related 16 like 1)
Canis lupus familiaris (dog) : ATG16L1 (autophagy related 16 like 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atg16l1 (autophagy related 16 like 1)
Chlorocebus sabaeus (African green monkey) : ATG16L1 (autophagy related 16 like 1)
Heterocephalus glaber (naked mole-rat) : Atg16l1 (autophagy related 16 like 1)
more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15133,651,286 - 133,706,038 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115133,651,294 - 133,693,472 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215147,677,835 - 147,718,756 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - uncurated

Genomics

Comparative Map Data

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
 
More on ATG16L1
NCBI Gene
Ensembl Gene
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 14126579
Created: 2019-01-29
Species: Sus scrofa
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.