SUPT20H (SPT20 homolog, SAGA complex component) - Chinchilla Research Resource Database
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Gene: SUPT20H (SPT20 homolog, SAGA complex component) Sus scrofa
Analyze
Symbol: SUPT20H
Name: SPT20 homolog, SAGA complex component
CRRD ID: 14161577
Description: ENCODES a protein that exhibits transcription coregulator activity (inferred); INVOLVED IN positive regulation of gluconeogenesis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN SAGA-type complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: transcription factor SPT20 homolog
Orthologs:
Homo sapiens (human) : SUPT20H (SPT20 homolog, SAGA complex component)  HGNC  Alliance
Mus musculus (house mouse) : Supt20 (SPT20 SAGA complex component)  MGI  Alliance
Rattus norvegicus (Norway rat) : Supt20h (SPT20 homolog, SAGA complex component)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Supt20h (SPT20 homolog, SAGA complex component)
Pan paniscus (bonobo/pygmy chimpanzee) : SUPT20H (SPT20 homolog, SAGA complex component)
Canis lupus familiaris (dog) : SUPT20H (SPT20 homolog, SAGA complex component)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Supt20h (SPT20 homolog, SAGA complex component)
Chlorocebus sabaeus (African green monkey) : SUPT20H (SPT20 homolog, SAGA complex component)
Heterocephalus glaber (naked mole-rat) : Supt20h (SPT20 homolog, SAGA complex component)
more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1112,825,760 - 12,864,929 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11112,825,758 - 12,864,935 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21112,814,393 - 12,827,510 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View


Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
SUPT20H
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1112,825,760 - 12,864,929 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11112,825,758 - 12,864,935 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21112,814,393 - 12,827,510 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SUPT20H
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1337,009,312 - 37,059,713 (-)EnsemblGRCh38hg38GRCh38
GRCh381337,009,312 - 37,059,714 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371337,583,449 - 37,633,850 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361336,481,449 - 36,531,850 (-)NCBINCBI36hg18NCBI36
Build 341336,481,630 - 36,531,787NCBI
Celera1318,650,692 - 18,701,096 (-)NCBI
Cytogenetic Map13q13.3NCBI
HuRef1318,394,967 - 18,445,535 (-)NCBIHuRef
CHM1_11337,550,999 - 37,601,397 (-)NCBICHM1_1
Supt20
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39354,600,181 - 54,636,184 (+)NCBI
GRCm38354,692,760 - 54,728,763 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl354,692,807 - 54,728,766 (+)EnsemblGRCm38mm10GRCm38
MGSCv37354,497,027 - 54,520,759 (+)NCBIGRCm37mm9NCBIm37
MGSCv36354,781,034 - 54,804,766 (+)NCBImm8
Celera354,414,785 - 54,438,517 (+)NCBICelera
Cytogenetic Map3CNCBI
Supt20h
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02143,892,609 - 143,925,733 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2143,892,567 - 143,925,633 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02160,337,768 - 160,370,787 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42143,921,831 - 143,955,032 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12143,871,793 - 143,904,995 (+)NCBI
Celera2133,382,206 - 133,415,296 (+)NCBICelera
Cytogenetic Map2q26NCBI
Supt20h
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554319,014,726 - 9,050,844 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554319,013,325 - 9,050,844 (+)NCBIChiLan1.0ChiLan1.0
SUPT20H
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11336,647,184 - 36,698,654 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1336,647,544 - 36,687,513 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01318,217,142 - 18,268,937 (-)NCBI
SUPT20H
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl253,658,795 - 3,701,763 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1253,658,528 - 3,698,487 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Supt20h
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_00493647231,119,671 - 31,129,939 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SUPT20H
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl315,529,378 - 15,578,293 (-)Ensembl
ChlSab1.1315,529,023 - 15,578,330 (-)NCBI
Supt20h
(Heterocephalus glaber - naked mole-rat)
No map positions available.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 10 4 3 5 2 23 2 3 3
Low
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021065219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021065263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK343522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GFLN01049331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSSSCT00000010256   ⟹   ENSSSCP00000009989
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1112,825,763 - 12,864,665 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000037044   ⟹   ENSSSCP00000044014
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1112,825,763 - 12,864,929 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000040086   ⟹   ENSSSCP00000042095
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1112,825,760 - 12,864,634 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000052734   ⟹   ENSSSCP00000034551
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1112,825,762 - 12,864,705 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000053123   ⟹   ENSSSCP00000031720
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1112,825,762 - 12,864,720 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000060979   ⟹   ENSSSCP00000035347
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1112,825,760 - 12,864,634 (-)Ensembl
RefSeq Acc Id: XM_021065219   ⟹   XP_020920878
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065220   ⟹   XP_020920879
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,537 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065221   ⟹   XP_020920880
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,904 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065222   ⟹   XP_020920881
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,182 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065223   ⟹   XP_020920882
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065224   ⟹   XP_020920883
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,537 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065225   ⟹   XP_020920884
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,904 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065226   ⟹   XP_020920885
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,423 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065227   ⟹   XP_020920886
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,423 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065228   ⟹   XP_020920887
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065229   ⟹   XP_020920888
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,537 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065230   ⟹   XP_020920889
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,914 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065231   ⟹   XP_020920890
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,182 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065232   ⟹   XP_020920891
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,698 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065233   ⟹   XP_020920892
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,537 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065234   ⟹   XP_020920893
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,758 - 12,864,662 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065235   ⟹   XP_020920894
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,771 - 12,864,705 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065236   ⟹   XP_020920895
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,858,933 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065237   ⟹   XP_020920896
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,758 - 12,864,423 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065238   ⟹   XP_020920897
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,768 - 12,864,690 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065239   ⟹   XP_020920898
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,935 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065240   ⟹   XP_020920899
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,944 - 12,864,471 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065241   ⟹   XP_020920900
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,459 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065242   ⟹   XP_020920901
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,944 - 12,864,663 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065243   ⟹   XP_020920902
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,930 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065244   ⟹   XP_020920903
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,476 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065245   ⟹   XP_020920904
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,929 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065246   ⟹   XP_020920905
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,674 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065247   ⟹   XP_020920906
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,675 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065248   ⟹   XP_020920907
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,694 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065249   ⟹   XP_020920908
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,771 - 12,864,929 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065250   ⟹   XP_020920909
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,477 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065251   ⟹   XP_020920910
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,423 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065252   ⟹   XP_020920911
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,916 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065254   ⟹   XP_020920913
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,758 - 12,864,423 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065255   ⟹   XP_020920914
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,671 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065256   ⟹   XP_020920915
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,642 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065257   ⟹   XP_020920916
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,871 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065258   ⟹   XP_020920917
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,928 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065259   ⟹   XP_020920918
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,674 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065260   ⟹   XP_020920919
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,771 - 12,864,935 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065261   ⟹   XP_020920920
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,490 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065262   ⟹   XP_020920921
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,642 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021065263   ⟹   XP_020920922
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11112,825,932 - 12,864,642 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_020920878 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920879 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920880 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920881 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920882 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920883 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920884 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920885 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920886 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920887 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920888 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920889 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920890 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920891 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920892 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920893 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920894 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920895 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920896 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920897 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920898 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920899 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920900 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920901 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920902 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920903 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920904 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920905 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920906 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920907 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920908 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920909 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920910 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920911 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920913 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920914 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920915 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920916 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920917 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920918 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920919 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920920 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920921 (Get FASTA)   NCBI Sequence Viewer  
  XP_020920922 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_020920893   ⟸   XM_021065234
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_020920913   ⟸   XM_021065254
- Peptide Label: isoform X20
- Sequence:
RefSeq Acc Id: XP_020920896   ⟸   XM_021065237
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_020920897   ⟸   XM_021065238
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_020920919   ⟸   XM_021065260
- Peptide Label: isoform X23
- Sequence:
RefSeq Acc Id: XP_020920908   ⟸   XM_021065249
- Peptide Label: isoform X17
- Sequence:
RefSeq Acc Id: XP_020920894   ⟸   XM_021065235
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_020920898   ⟸   XM_021065239
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_020920902   ⟸   XM_021065243
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_020920904   ⟸   XM_021065245
- Peptide Label: isoform X15
- Sequence:
RefSeq Acc Id: XP_020920917   ⟸   XM_021065258
- Peptide Label: isoform X22
- Sequence:
RefSeq Acc Id: XP_020920911   ⟸   XM_021065252
- Peptide Label: isoform X19
- Sequence:
RefSeq Acc Id: XP_020920889   ⟸   XM_021065230
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_020920884   ⟸   XM_021065225
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_020920880   ⟸   XM_021065221
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_020920916   ⟸   XM_021065257
- Peptide Label: isoform X21
- Sequence:
RefSeq Acc Id: XP_020920891   ⟸   XM_021065232
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_020920887   ⟸   XM_021065228
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_020920882   ⟸   XM_021065223
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_020920878   ⟸   XM_021065219
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_020920907   ⟸   XM_021065248
- Peptide Label: isoform X17
- Sequence:
RefSeq Acc Id: XP_020920906   ⟸   XM_021065247
- Peptide Label: isoform X16
- Sequence:
RefSeq Acc Id: XP_020920918   ⟸   XM_021065259
- Peptide Label: isoform X23
- Sequence:
RefSeq Acc Id: XP_020920905   ⟸   XM_021065246
- Peptide Label: isoform X16
- Sequence:
RefSeq Acc Id: XP_020920914   ⟸   XM_021065255
- Peptide Label: isoform X21
- Sequence:
RefSeq Acc Id: XP_020920921   ⟸   XM_021065262
- Peptide Label: isoform X24
- Sequence:
RefSeq Acc Id: XP_020920922   ⟸   XM_021065263
- Peptide Label: isoform X25
- Sequence:
RefSeq Acc Id: XP_020920915   ⟸   XM_021065256
- Peptide Label: isoform X21
- Sequence:
RefSeq Acc Id: XP_020920892   ⟸   XM_021065233
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_020920888   ⟸   XM_021065229
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_020920883   ⟸   XM_021065224
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_020920879   ⟸   XM_021065220
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_020920920   ⟸   XM_021065261
- Peptide Label: isoform X23
- Sequence:
RefSeq Acc Id: XP_020920909   ⟸   XM_021065250
- Peptide Label: isoform X17
- Sequence:
RefSeq Acc Id: XP_020920903   ⟸   XM_021065244
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_020920900   ⟸   XM_021065241
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_020920886   ⟸   XM_021065227
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_020920910   ⟸   XM_021065251
- Peptide Label: isoform X18
- Sequence:
RefSeq Acc Id: XP_020920885   ⟸   XM_021065226
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_020920890   ⟸   XM_021065231
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_020920881   ⟸   XM_021065222
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_020920895   ⟸   XM_021065236
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_020920901   ⟸   XM_021065242
- Peptide Label: isoform X13
- Sequence:
RefSeq Acc Id: XP_020920899   ⟸   XM_021065240
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: ENSSSCP00000042095   ⟸   ENSSSCT00000040086
RefSeq Acc Id: ENSSSCP00000009989   ⟸   ENSSSCT00000010256
RefSeq Acc Id: ENSSSCP00000035347   ⟸   ENSSSCT00000060979
RefSeq Acc Id: ENSSSCP00000044014   ⟸   ENSSSCT00000037044
RefSeq Acc Id: ENSSSCP00000034551   ⟸   ENSSSCT00000052734
RefSeq Acc Id: ENSSSCP00000031720   ⟸   ENSSSCT00000053123


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000009359 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00070004697 UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000009989 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00000031720 UniProtKB/TrEMBL
  ENSSSCP00000034551 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00000035347 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00000042095 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00000044014 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00070009083 UniProtKB/TrEMBL
  ENSSSCP00070009100 UniProtKB/TrEMBL
  ENSSSCP00070009121 UniProtKB/TrEMBL
  ENSSSCP00070009177 UniProtKB/TrEMBL
  ENSSSCP00070009211 UniProtKB/TrEMBL
  ENSSSCP00070009215 UniProtKB/TrEMBL
  ENSSSCP00070009225 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000010256 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00000037044 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00000040086 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00000052734 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00000053123 UniProtKB/TrEMBL
  ENSSSCT00000060979 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00070011034 UniProtKB/TrEMBL
  ENSSSCT00070011055 UniProtKB/TrEMBL
  ENSSSCT00070011078 UniProtKB/TrEMBL
  ENSSSCT00070011135 UniProtKB/TrEMBL
  ENSSSCT00070011169 UniProtKB/TrEMBL
  ENSSSCT00070011173 UniProtKB/TrEMBL
  ENSSSCT00070011184 UniProtKB/TrEMBL
InterPro Spt20 UniProtKB/TrEMBL
NCBI Gene SUPT20H ENTREZGENE
PANTHER PTHR13526 UniProtKB/TrEMBL
Pfam Spt20 UniProtKB/TrEMBL
UniGene Ssc.98210 ENTREZGENE
UniProt A0A286ZJT3_PIG UniProtKB/TrEMBL
  A0A286ZSW0_PIG UniProtKB/TrEMBL
  A0A286ZUS3_PIG UniProtKB/TrEMBL
  A0A287ADP2_PIG UniProtKB/TrEMBL
  A0A287AJF1_PIG UniProtKB/TrEMBL
  A0A4X1T0B0_PIG UniProtKB/TrEMBL
  A0A4X1T0I4_PIG UniProtKB/TrEMBL
  A0A4X1T0L5_PIG UniProtKB/TrEMBL
  A0A4X1T1R4_PIG UniProtKB/TrEMBL
  A0A4X1T2S8_PIG UniProtKB/TrEMBL
  A0A4X1T3C6_PIG UniProtKB/TrEMBL
  F1RS39_PIG UniProtKB/TrEMBL

 



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.