Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: DEPDC5 (DEP domain containing 5, GATOR1 subcomplex subunit) Sus scrofa
Analyze
Symbol: DEPDC5
Name: DEP domain containing 5, GATOR1 subcomplex subunit
CRRD ID: 14199318
Description: ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy (ortholog); benign epilepsy with centrotemporal spikes (ortholog); Developmental Disabilities (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); lysosome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: DEP domain containing 5; DEP domain-containing protein 5
Orthologs:
Homo sapiens (human) : DEPDC5 (DEP domain containing 5, GATOR1 subcomplex subunit)  HGNC  Alliance
Mus musculus (house mouse) : Depdc5 (DEP domain containing 5)  MGI  Alliance
Rattus norvegicus (Norway rat) : Depdc5 (DEP domain containing 5, GATOR1 subcomplex subunit)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Depdc5 (DEP domain containing 5, GATOR1 subcomplex subunit)
Pan paniscus (bonobo/pygmy chimpanzee) : DEPDC5 (DEP domain containing 5, GATOR1 subcomplex subunit)
Canis lupus familiaris (dog) : DEPDC5 (DEP domain containing 5, GATOR1 subcomplex subunit)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Depdc5 (DEP domain containing 5, GATOR1 subcomplex subunit)
Chlorocebus sabaeus (African green monkey) : DEPDC5 (DEP domain containing 5, GATOR1 subcomplex subunit)
Heterocephalus glaber (naked mole-rat) : Depdc5 (DEP domain containing 5, GATOR1 subcomplex subunit)
more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11448,421,788 - 48,523,530 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21451,687,092 - 51,788,759 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model



Genomics

Comparative Map Data

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
Nomenclature History
 
More on DEPDC5
NCBI Gene
Ensembl Gene
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 14199318
Created: 2019-01-29
Species: Sus scrofa
Last Modified: 2020-09-01
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.