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Gene: Aspn (asporin) Rattus norvegicus
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Symbol: Aspn
Name: asporin
Description: Predicted to have calcium ion binding activity. Involved in response to fluoride. Localizes to the cell projection. Human ortholog(s) of this gene implicated in ankylosing spondylitis; degenerative disc disease; and osteoarthritis. Orthologous to human ASPN (asporin); INTERACTS WITH 1-naphthyl isothiocyanate; 3,3',5,5'-tetrabromobisphenol A; 4,4'-diaminodiphenylmethane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC306805; similar to asporin precursor
Orthologs:
Homo sapiens (human) : ASPN (asporin)  HGNC  Alliance
Mus musculus (house mouse) : Aspn (asporin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Aspn (asporin)
Pan paniscus (bonobo/pygmy chimpanzee) : ASPN (asporin)
Canis lupus familiaris (dog) : ASPN (asporin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Aspn (asporin)
Sus scrofa (pig) : ASPN (asporin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Note: GeneIDs 103690027 and 306805 are annotated independently on Rnor_6.0 but may be redundant loci. [06 Feb 2015]
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01714,655,958 - 14,681,355 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01717,554,966 - 17,577,763 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01716,708,328 - 16,731,849 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41721,035,597 - 21,058,999 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1714,811,448 - 14,834,831 (-)NCBICelera
Cytogenetic Map17p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Aspn
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1549776
Created: 2005-09-15
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.