Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Jmjd1c (jumonji domain containing 1C) Mus musculus
Analyze
Symbol: Jmjd1c
Name: jumonji domain containing 1C
CRRD ID: 1551400
Description: Predicted to have chromatin DNA binding activity; histone demethylase activity (H3-K9 specific); and transcription coregulator activity. Involved in several processes, including male germ-line stem cell population maintenance; reproductive senescence; and seminiferous tubule development. Predicted to localize to chromatin and histone deacetylase complex. Is expressed in several structures, including central nervous system; genitourinary system; heart; inner ear; and limb. Orthologous to human JMJD1C (jumonji domain containing 1C); PARTICIPATES IN histone modification pathway; INTERACTS WITH 1,2-dimethylhydrazine; 3,4-methylenedioxymethamphetamine; 4-hydroxyphenyl retinamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 5430433L24Rik; D630035I23Rik; Jmjdic; jumonji domain-containing protein 1C; probable JmjC domain-containing histone demethylation protein 2C; TR; TRIP8
Orthologs:
Homo sapiens (human) : JMJD1C (jumonji domain containing 1C)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Jmjd1c (jumonji domain containing 1C)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Jmjd1c (jumonji domain containing 1C)
Pan paniscus (bonobo/pygmy chimpanzee) : JMJD1C (jumonji domain containing 1C)
Canis lupus familiaris (dog) : JMJD1C (jumonji domain containing 1C)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Jmjd1c (jumonji domain containing 1C)
Sus scrofa (pig) : JMJD1C (jumonji domain containing 1C)
Chlorocebus sabaeus (African green monkey) : JMJD1C (jumonji domain containing 1C)
Heterocephalus glaber (naked mole-rat) : Jmjd1c (jumonji domain containing 1C)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391066,932,189 - 67,092,105 (+)NCBI
GRCm381067,096,351 - 67,256,326 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1067,096,125 - 67,256,326 (+)EnsemblGRCm38mm10GRCm38
MGSCv371066,590,006 - 66,719,074 (+)NCBIGRCm37mm9NCBIm37
MGSCv361066,522,615 - 66,651,683 (+)NCBImm8
Celera1068,219,302 - 68,348,326 (+)NCBICelera
Cytogenetic Map10B5.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
 
More on Jmjd1c
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1551400
Created: 2005-09-30
Species: Mus musculus
Last Modified: 2020-10-13
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.