Olfr125 (olfactory receptor 125) - Chinchilla Research Resource Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Olfr125 (olfactory receptor 125) Mus musculus
Analyze
Symbol: Olfr125
Name: olfactory receptor 125
CRRD ID: 1552108
Description: Predicted to have odorant binding activity and olfactory receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and sensory perception of smell. Predicted to localize to integral component of membrane. Is expressed in olfactory epithelium. Orthologous to human OR14J1 (olfactory receptor family 14 subfamily J member 1).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: GA_x6K02T2PSCP-2291580-2292542; MOR218; MOR218-8; olfactory receptor MOR218-8
Orthologs:
Homo sapiens (human) : OR14J1 (olfactory receptor family 14 subfamily J member 1)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Olr1693 (olfactory receptor 1693)  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : LOC100970983 (olfactory receptor 14J1)
Canis lupus familiaris (dog) : OR14J1B (olfactory receptor family 14 subfamily J member 1B)
Chlorocebus sabaeus (African green monkey) : LOC103221890 (olfactory receptor 14J1)
Heterocephalus glaber (naked mole-rat) : LOC101726258 (olfactory receptor 14J1)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391738,145,802 - 38,146,919 (+)NCBI
GRCm381737,834,911 - 37,836,028 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1737,832,949 - 37,838,490 (+)EnsemblGRCm38mm10GRCm38
MGSCv371737,971,856 - 37,972,973 (+)NCBIGRCm37mm9NCBIm37
MGSCv361737,443,054 - 37,444,016 (+)NCBImm8
Celera1741,274,402 - 41,275,519 (+)NCBICelera
Cytogenetic Map17B1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
1. MGD data from the GO Consortium
2. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11802173   PMID:11875048   PMID:12477932   PMID:14506126   PMID:14611657   PMID:21267068   PMID:21873635  


Genomics

Comparative Map Data
Olfr125
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391738,145,802 - 38,146,919 (+)NCBI
GRCm381737,834,911 - 37,836,028 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1737,832,949 - 37,838,490 (+)EnsemblGRCm38mm10GRCm38
MGSCv371737,971,856 - 37,972,973 (+)NCBIGRCm37mm9NCBIm37
MGSCv361737,443,054 - 37,444,016 (+)NCBImm8
Celera1741,274,402 - 41,275,519 (+)NCBICelera
Cytogenetic Map17B1NCBI
OR14J1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl629,301,701 - 29,313,017 (+)EnsemblGRCh38hg38GRCh38
GRCh38629,301,701 - 29,313,017 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37629,274,467 - 29,275,432 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36629,382,446 - 29,383,411 (+)NCBINCBI36hg18NCBI36
Build 34629,382,445 - 29,383,411NCBI
Celera630,880,644 - 30,881,609 (+)NCBI
Cytogenetic Map6p22.1NCBI
HuRef629,082,076 - 29,083,041 (+)NCBIHuRef
CHM1_1629,276,729 - 29,277,694 (+)NCBICHM1_1
Olr1693
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.020830,485 - 831,447 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl20830,485 - 831,447 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.020814,959 - 815,921 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.420646,784 - 647,746 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.120646,783 - 647,746 (-)NCBI
Celera201,463,529 - 1,464,491 (-)NCBICelera
Cytogenetic Map20p12NCBI
LOC100970983
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1629,783,067 - 29,784,172 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl629,783,126 - 29,784,091 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0629,124,922 - 29,126,027 (+)NCBIMhudiblu_PPA_v0panPan3
OR14J1B
(Canis lupus familiaris - dog)
No map positions available.
LOC103221890
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl1743,257,284 - 43,258,246 (-)Ensembl
ChlSab1.11743,256,772 - 43,261,237 (-)NCBI
LOC101726258
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624756111,415 - 112,465 (-)NCBI

Position Markers
UniSTS:491603  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381737,834,911 - 37,836,028UniSTSGRCm38
MGSCv371737,971,856 - 37,972,973UniSTSGRCm37
Celera1741,274,402 - 41,275,519UniSTS
Cytogenetic Map17B1UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
CRRD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17392461548559063Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined480447745359340Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17480447746158776Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17480447747574740Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined480447765330362Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17667496240674962Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17836594042366175Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17836594042366175Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined17986241186688972Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171065914544659245Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1098759739053168Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1166699745667145Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171177921045779210Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171206732483054339Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171223281346232813Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171242798746427987Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171390439847904522Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171484267848842786Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171484267848842786Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171484267848842786Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171484267848842786Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171660074750600869Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171660074750600869Mouse
1301505Tir1_mtrypanosome infection response 1 (mouse)Not determined171660074750600869Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171681096950811104Mouse
1302042Acsns3_mAngiostrongylus costaricensis nematode susceptibility 3 (mouse)Not determined171724323451243371Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171724323451243371Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171724323451243371Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171724323451243371Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171724323451243371Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171795643651959238Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171819938152202007Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171820316552205351Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171883413352834133Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172430185958301973Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172485760955405969Mouse
10412196Bbaa28_mB.burgdorferi-associated arthritis 28 (mouse)Not determined172536594043665344Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172574029459740461Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172618203852604676Mouse
1300602Eye2_meye weight 2 (mouse)Not determined172628636340794146Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172657408160574223Mouse
11075105Modc1_mmodifier of Odc1 (mouse)172749681845311728Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172750432261504322Mouse
10045977Tir9_mtrypanosome infection response 9 (mouse)Not determined172765914543574223Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172831148062311728Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined172982162963821740Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3072257564722705Mouse
4141357Mrdq1_mmodifier of retinal degeneration QTL 1 (mouse)Not determined3076892947728778Mouse
26884379Skwq5_mskull length QTL 5, 5 week (mouse)173290000053800000Mouse
1300885Mbis4_mMycobacterium bovis-induced systemic lupus erythematosus 4 (mouse)Not determined173495684169858931Mouse
10755514Amzn2_manatomical modifier of Zfp423 2 (mouse)173565926669659396Mouse
12904951Smmq2_msoleus muscle mass QTL 2 (mouse)173648271570482715Mouse
1301474Hcbip2_mhexachlorobenzene induced porphyria 2 (mouse)Not determined173748216445311728Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:79
Count of miRNA genes:79
Interacting mature miRNAs:79
Transcripts:ENSMUST00000050255
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000050255   ⟹   ENSMUSP00000055221
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1737,834,911 - 37,836,028 (+)Ensembl
RefSeq Acc Id: ENSMUST00000213857   ⟹   ENSMUSP00000149602
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1737,832,949 - 37,838,490 (+)Ensembl
RefSeq Acc Id: NM_146290   ⟹   NP_666402
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391738,145,802 - 38,146,919 (+)NCBI
GRCm381737,834,911 - 37,836,028 (+)ENTREZGENE
MGSCv371737,971,856 - 37,972,973 (+)RGD
Celera1741,274,402 - 41,275,519 (+)RGD
cM Map17 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_666402   ⟸   NM_146290
- UniProtKB: Q14AJ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000149602   ⟸   ENSMUST00000213857
RefSeq Acc Id: ENSMUSP00000055221   ⟸   ENSMUST00000050255
Protein Domains
G_PROTEIN_RECEP_F1_2


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2177508 AgrOrtholog
Ensembl Genes ENSMUSG00000050613 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000055221 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000149602 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000050255 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000213857 UniProtKB/TrEMBL
InterPro 7TM_GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_supfam UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report mmu:258287 UniProtKB/TrEMBL
MGD MGI:2177508 ENTREZGENE
NCBI Gene 258287 ENTREZGENE
Pfam 7tm_4 UniProtKB/TrEMBL
PhenoGen Olfr125 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
UniGene Mm.377416 ENTREZGENE
UniProt Q14AJ9 ENTREZGENE, UniProtKB/TrEMBL
  Q6UAD6_MOUSE UniProtKB/TrEMBL
  Q8VEU5_MOUSE UniProtKB/TrEMBL