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Analyze GeneStrainQTL List |
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![]() Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | 17alpha-ethynylestradiol | increases expression | EXP | | 6480464 | Ethinyl Estradiol results in increased expression of UBAC1 mRNA | CTD | PMID:17942748 | 17alpha-ethynylestradiol | affects expression | EXP | | 6480464 | Ethinyl Estradiol affects the expression of UBAC1 mRNA | CTD | PMID:17555576 | 17alpha-ethynylestradiol | multiple interactions | EXP | | 6480464 | [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in decreased expression of UBAC1 mRNA | CTD | PMID:17942748 | 2,3,7,8-tetrachlorodibenzodioxine | multiple interactions | EXP | | 6480464 | [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in decreased expression of UBAC1 mRNA | CTD | PMID:17942748 | 2,3,7,8-tetrachlorodibenzodioxine | affects expression | EXP | | 6480464 | Tetrachlorodibenzodioxin affects the expression of UBAC1 mRNA | CTD | PMID:21570461 | 2,3,7,8-tetrachlorodibenzodioxine | decreases expression | ISO | RGD:1359542 | 6480464 | Tetrachlorodibenzodioxin results in decreased expression of UBAC1 mRNA | CTD | PMID:21215274 | 2,4-dinitrotoluene | affects expression | ISO | RGD:1359542 | 6480464 | 2, 4-dinitrotoluene affects the expression of UBAC1 mRNA | CTD | PMID:21346803 | 3,3',4,4'-tetrachlorobiphenyl | multiple interactions | EXP | | 6480464 | 3 more ... | CTD | PMID:19467301 | 5-aza-2'-deoxycytidine | increases expression | ISO | RGD:1346576 | 6480464 | Decitabine results in increased expression of UBAC1 mRNA | CTD | PMID:17908484 | 6-propyl-2-thiouracil | decreases expression | ISO | RGD:1359542 | 6480464 | Propylthiouracil results in decreased expression of UBAC1 mRNA | CTD | PMID:24780913 | acrylamide | increases expression | ISO | RGD:1359542 | 6480464 | Acrylamide results in increased expression of UBAC1 mRNA | CTD | PMID:28959563 | aflatoxin B1 | increases methylation | ISO | RGD:1346576 | 6480464 | Aflatoxin B1 results in increased methylation of UBAC1 exon | CTD | PMID:30157460 | benzo[a]pyrene | multiple interactions | EXP | | 6480464 | AHR protein affects the reaction [Benzo(a)pyrene affects the expression of UBAC1 mRNA] | CTD | PMID:22228805 | benzo[a]pyrene | increases expression | EXP | | 6480464 | Benzo(a)pyrene results in increased expression of UBAC1 mRNA | CTD | PMID:19770486, PMID:22228805 | beta-naphthoflavone | multiple interactions | ISO | RGD:1359542 | 6480464 | [Diethylnitrosamine co-treated with beta-Naphthoflavone] results in decreased expression of UBAC1 mRNA | CTD | PMID:18164116 | bisphenol A | affects expression | ISO | RGD:1359542 | 6480464 | bisphenol A affects the expression of UBAC1 mRNA | CTD | PMID:25181051 | cadmium dichloride | decreases methylation | ISO | RGD:1359542 | 6480464 | Cadmium Chloride results in decreased methylation of UBAC1 promoter | CTD | PMID:22457795 | cadmium dichloride | increases expression | ISO | RGD:1346576 | 6480464 | Cadmium Chloride results in increased expression of UBAC1 mRNA | CTD | PMID:26472689 | copper atom | multiple interactions | ISO | RGD:1346576 | 6480464 | [NSC 689534 binds to Copper] which results in decreased expression of UBAC1 mRNA | CTD | PMID:20971185 | copper(0) | multiple interactions | ISO | RGD:1346576 | 6480464 | [NSC 689534 binds to Copper] which results in decreased expression of UBAC1 mRNA | CTD | PMID:20971185 | copper(II) sulfate | decreases expression | ISO | RGD:1346576 | 6480464 | Copper Sulfate results in decreased expression of UBAC1 mRNA | CTD | PMID:19549813 | cyclosporin A | decreases expression | ISO | RGD:1346576 | 6480464 | Cyclosporine results in decreased expression of UBAC1 mRNA | CTD | PMID:20106945, PMID:25562108 | N-nitrosodiethylamine | multiple interactions | ISO | RGD:1359542 | 6480464 | [Diethylnitrosamine co-treated with beta-Naphthoflavone] results in decreased expression of UBAC1 mRNA | CTD | PMID:18164116 | oxaliplatin | multiple interactions | ISO | RGD:1359542 | 6480464 | [oxaliplatin co-treated with Topotecan] results in decreased expression of UBAC1 mRNA | CTD | PMID:25729387 | paracetamol | affects expression | EXP | | 6480464 | Acetaminophen affects the expression of UBAC1 mRNA | CTD | PMID:17562736 | paracetamol | affects response to substance | ISO | RGD:1346576 | 6480464 | UBAC1 gene polymorphism affects the susceptibility to Acetaminophen | CTD | PMID:26104854 | sodium fluoride | increases expression | EXP | | 6480464 | Sodium Fluoride results in increased expression of UBAC1 protein | CTD | PMID:28918527 | Soman | decreases expression | ISO | RGD:1359542 | 6480464 | Soman results in decreased expression of UBAC1 mRNA | CTD | PMID:19281266 | tamoxifen | affects expression | EXP | | 6480464 | Tamoxifen affects the expression of UBAC1 mRNA | CTD | PMID:17555576 | topotecan | multiple interactions | ISO | RGD:1359542 | 6480464 | [oxaliplatin co-treated with Topotecan] results in decreased expression of UBAC1 mRNA | CTD | PMID:25729387 | topotecan | decreases expression | ISO | RGD:1359542 | 6480464 | Topotecan results in decreased expression of UBAC1 mRNA | CTD | PMID:25729387 | valproic acid | affects expression | EXP | | 6480464 | Valproic Acid affects the expression of UBAC1 mRNA | CTD | PMID:17292431 | |
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1. | Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90. |
2. | Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73. |
3. | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
4. | RGD automated import pipeline for gene-chemical interactions |
PubMed | 8889548 10349636 10922068 11042159 11076861 12477932 12520002 14610273 15489334 15531880 15782199 16141072 16141073 21267068 21677750 26303204 28190767 |
Ubac1 (Mus musculus - house mouse) |
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UBAC1 (Homo sapiens - human) |
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Ubac1 (Rattus norvegicus - Norway rat) |
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Ubac1 (Chinchilla lanigera - long-tailed chinchilla) |
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UBAC1 (Pan paniscus - bonobo/pygmy chimpanzee) |
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UBAC1 (Canis lupus familiaris - dog) |
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Ubac1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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UBAC1 (Sus scrofa - pig) |
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RH128711 |
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AA407978 |
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The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
RefSeq Transcripts | NM_001362681 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_133835 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006498465 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_030252260 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_030252261 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_030252262 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AK004060 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AK157857 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK161969 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK162577 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK177482 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK186117 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK187016 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK191896 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK197619 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK200854 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK202826 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK205743 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK206541 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK207047 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK208228 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK209158 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK209934 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK210592 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK213285 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK217076 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK219232 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AL731682 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AL845455 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC021811 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH466542 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CX243095 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | NM_001362681 ⟹ NP_001349610 | |||||||||
RefSeq Status: | VALIDATED | |||||||||
Type: | CODING | |||||||||
Position: |
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RefSeq Acc Id: | NM_133835 ⟹ NP_598596 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
CGGCTGCGACCGCGCGCTCCGGGCGGCTACGGCGACACGGGCAGTGGCAGCAAGGGTACAGCTChide sequence |
RefSeq Acc Id: | XM_006498465 ⟹ XP_006498528 | |||||||||
RefSeq Status: | ||||||||||
Type: | CODING | |||||||||
Position: |
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Sequence: |
GCTCATTACGCACTTCCGGCGCGGCTGCGACCGCGCGCTCCGGGCGGCTACGGCGACACGGGCAhide sequence |
RefSeq Acc Id: | XM_030252260 ⟹ XP_030108120 | |||||||||
RefSeq Status: | ||||||||||
Type: | CODING | |||||||||
Position: |
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RefSeq Acc Id: | XM_030252261 ⟹ XP_030108121 | |||||||||
RefSeq Status: | ||||||||||
Type: | CODING | |||||||||
Position: |
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RefSeq Acc Id: | XM_030252262 ⟹ XP_030108122 | |||||||||
RefSeq Status: | ||||||||||
Type: | CODING | |||||||||
Position: |
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Protein RefSeqs | NP_001349610 | (Get FASTA) | NCBI Sequence Viewer |
NP_598596 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006498528 | (Get FASTA) | NCBI Sequence Viewer | |
XP_030108120 | (Get FASTA) | NCBI Sequence Viewer | |
XP_030108121 | (Get FASTA) | NCBI Sequence Viewer | |
XP_030108122 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH21811 | (Get FASTA) | NCBI Sequence Viewer |
BAE34235 | (Get FASTA) | NCBI Sequence Viewer | |
EDL08285 | (Get FASTA) | NCBI Sequence Viewer | |
EDL08286 | (Get FASTA) | NCBI Sequence Viewer | |
Q8VDI7 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_598596 ⟸ NM_133835 |
- Peptide Label: | isoform 1 |
- UniProtKB: | Q8VDI7 (UniProtKB/Swiss-Prot) |
- Sequence: |
MFVQEEKIFAGKVLRLHICAADGAEWLEEATEDTSVEKLKESCLKHGAHGSLEDPKNVTHHKLIhide sequence |
RefSeq Acc Id: | XP_006498528 ⟸ XM_006498465 |
- Peptide Label: | isoform X1 |
- Sequence: |
MFVQEEKIFAGKVLRLHICAADGAEWLEEATEDTSVEKLKESCLKHGAHGSLEDPKNVTHHKLIhide sequence |
RefSeq Acc Id: | NP_001349610 ⟸ NM_001362681 |
- Peptide Label: | isoform 2 |
RefSeq Acc Id: | XP_030108121 ⟸ XM_030252261 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_030108120 ⟸ XM_030252260 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_030108122 ⟸ XM_030252262 |
- Peptide Label: | isoform X3 |
RGD ID: | 6833039 | |||||||||
Promoter ID: | MM_KWN:28221 | |||||||||
Type: | Non-CpG | |||||||||
SO ACC ID: | SO:0000170 | |||||||||
Source: | MPROMDB | |||||||||
Tissues & Cell Lines: | Lung | |||||||||
Transcripts: | OTTMUST00000030352, UC008IUA.1 | |||||||||
Position: |
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RGD ID: | 6833019 | |||||||||
Promoter ID: | MM_KWN:28222 | |||||||||
Type: | Non-CpG | |||||||||
SO ACC ID: | SO:0000170 | |||||||||
Source: | MPROMDB | |||||||||
Tissues & Cell Lines: | Brain, Kidney | |||||||||
Transcripts: | OTTMUST00000030351 | |||||||||
Position: |
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RGD ID: | 6833017 | |||||||||
Promoter ID: | MM_KWN:28225 | |||||||||
Type: | CpG-Island | |||||||||
SO ACC ID: | SO:0000170 | |||||||||
Source: | MPROMDB | |||||||||
Tissues & Cell Lines: | 3T3L1_Day3, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen | |||||||||
Transcripts: | ENSMUST00000114161, ENSMUST00000114162, NM_133835, OTTMUST00000030346, OTTMUST00000030347, OTTMUST00000030348 | |||||||||
Position: |
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RGD ID: | 6876666 | |||||||||
Promoter ID: | EPDNEW_M1784 | |||||||||
Type: | initiation region | |||||||||
Name: | Ubac1_1 | |||||||||
Description: | Mus musculus ubiquitin associated domain containing 1 , mRNA. | |||||||||
SO ACC ID: | SO:0000170 | |||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | |||||||||
Experiment Methods: | Single-end sequencing. | |||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | MGI:1920995 | AgrOrtholog |
Ensembl Genes | ENSMUSG00000036352 | ENTREZGENE, UniProtKB/Swiss-Prot |
Ensembl Protein | ENSMUSP00000040220 | ENTREZGENE, UniProtKB/Swiss-Prot |
ENSMUSP00000117683 | UniProtKB/TrEMBL | |
ENSMUSP00000123115 | UniProtKB/TrEMBL | |
Ensembl Transcript | ENSMUST00000036509 | ENTREZGENE, UniProtKB/Swiss-Prot |
ENSMUST00000136750 | UniProtKB/TrEMBL | |
ENSMUST00000146363 | UniProtKB/TrEMBL | |
InterPro | STI1_HS-bd | UniProtKB/Swiss-Prot |
UBA | UniProtKB/Swiss-Prot | |
UBA-like_sf | UniProtKB/Swiss-Prot | |
UBA1_UBAC1 | UniProtKB/Swiss-Prot | |
UBA2_UBAC1 | UniProtKB/Swiss-Prot | |
Ubiquitin-like_domsf | UniProtKB/Swiss-Prot | |
KEGG Report | mmu:98766 | UniProtKB/Swiss-Prot |
MGD | MGI:1920995 | ENTREZGENE |
NCBI Gene | 98766 | ENTREZGENE |
Pfam | UBA | UniProtKB/Swiss-Prot |
PhenoGen | Ubac1 | PhenoGen |
PROSITE | UBA | UniProtKB/Swiss-Prot |
SMART | STI1 | UniProtKB/Swiss-Prot |
UBA | UniProtKB/Swiss-Prot | |
Superfamily-SCOP | SSF46934 | UniProtKB/Swiss-Prot |
SSF54236 | UniProtKB/Swiss-Prot | |
UniGene | Mm.247824 | ENTREZGENE |
UniProt | F6UMH9_MOUSE | UniProtKB/TrEMBL |
F6Z1E7_MOUSE | UniProtKB/TrEMBL | |
Q8VDI7 | ENTREZGENE, UniProtKB/Swiss-Prot | |
UniProt Secondary | Q3TZH3 | UniProtKB/Swiss-Prot |
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More on Ubac1 | |
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Alliance Gene |
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NCBI Gene |
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Ensembl Gene |
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JBrowse: mm9 mm10 |
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MGI Report |
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NCBI Genome Data Viewer |
CRRD Object Information | |
CRRD ID: | 1552773 |
Created: | 2005-09-30 |
Species: | Mus musculus |
Last Modified: | 2019-11-27 |
Status: | ACTIVE |
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.