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Gene: Vps13c (vacuolar protein sorting 13C) Mus musculus
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Symbol: Vps13c
Name: vacuolar protein sorting 13C
Description: Predicted to be involved in mitochondrion organization; negative regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization; and protein localization to organelle. Predicted to localize to the cytosol; extrinsic component of membrane; and mitochondrial outer membrane. Human ortholog(s) of this gene implicated in Parkinson's disease 23. Is expressed in several structures, including central nervous system; genitourinary system; gut; immune system; and skeleton. Orthologous to human VPS13C (vacuolar protein sorting 13 homolog C); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-diaminodiphenylmethane; tungsten.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI552542; AV026040; C230055H22Rik; chorein; vacuolar protein sorting 13C (yeast); vacuolar protein sorting-associated protein 13C; vps13c 5' variant II; vps13c 5' variant III; Vps13c 5' variant VI; W51662
Orthologs:
Homo sapiens (human) : VPS13C (vacuolar protein sorting 13 homolog C)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Vps13c (vacuolar protein sorting 13 homolog C)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vps13c (vacuolar protein sorting 13 homolog C)
Pan paniscus (bonobo/pygmy chimpanzee) : VPS13C (vacuolar protein sorting 13 homolog C)
Canis lupus familiaris (dog) : VPS13C (vacuolar protein sorting 13 homolog C)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vps13c (vacuolar protein sorting 13 homolog C)
Sus scrofa (pig) : VPS13C (vacuolar protein sorting 13 homolog C)
Chlorocebus sabaeus (green monkey) : VPS13C (vacuolar protein sorting 13 homolog C)
Heterocephalus glaber (naked mole-rat) : Vps13c (vacuolar protein sorting 13 homolog C)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm38 Ensembl967,840,396 - 67,995,638 (+)Ensembl
GRCm38967,840,316 - 67,997,744 (+)NCBIGRCm38GRCm38mm10GRCm38
MGSCv37967,688,203 - 67,843,441 (+)NCBIGRCm37mm9NCBIm37
MGSCv36968,440,120 - 68,593,896 (+)NCBImm8
MGSCv36967,639,567 - 67,796,023 (+)NCBImm8
Celera965,070,042 - 65,224,890 (+)NCBICelera
Cytogenetic Map9 CNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
Nomenclature History
 
More on Vps13c
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1557361
Created: 2005-11-30
Species: Mus musculus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.