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Gene: Lsm5 (LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated) Mus musculus
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Symbol: Lsm5
Name: LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
Description: Predicted to have protein heterodimerization activity. Involved in response to bacterium. Predicted to localize to several cellular components, including Lsm1-7-Pat1 complex; Lsm2-8 complex; and spliceosomal snRNP complex. Is expressed in esophagus; midbrain ventricular layer; renal cortex; telencephalon ventricular layer; and thymus primordium. Orthologous to human LSM5 (LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated); PARTICIPATES IN spliceosome pathway; INTERACTS WITH 1,2-dichloroethane; 1,2-dimethylhydrazine; 2,2',4,4'-Tetrabromodiphenyl ether.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 2010208O10Rik; 2310034K10Rik; LSM5 homolog, U6 small nuclear RNA associated; U6 snRNA-associated Sm-like protein LSm5
Orthologs:
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm38.p6 Ensembl656,701,063 - 56,704,710 (-)EnsemblGRCm38mm10GRCm38
GRCm38656,701,063 - 56,704,699 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv37656,651,057 - 56,654,693 (-)NCBIGRCm37mm9NCBIm37
MGSCv36656,630,641 - 56,634,261 (-)NCBImm8
Celera657,464,070 - 57,467,706 (-)NCBICelera
Cytogenetic Map6B3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
Nomenclature History
 
More on Lsm5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1557645
Created: 2005-11-30
Species: Mus musculus
Last Modified: 2020-08-18
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.