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Gene: Six6os1 (Six6 opposite strand transcript 1) Rattus norvegicus
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Symbol: Six6os1
Name: Six6 opposite strand transcript 1
Description: Predicted to be involved in gamete generation and meiosis I. Predicted to localize to the central element. Orthologous to human C14orf39 (chromosome 14 open reading frame 39); INTERACTS WITH bisphenol A; aflatoxin B1 (ortholog); arsenite(3-) (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC500673; RGD1559456; similar to RIKEN cDNA 4930447C04
Orthologs:
Homo sapiens (human) : C14orf39 (chromosome 14 open reading frame 39)  HGNC  Alliance
Mus musculus (house mouse) : 4930447C04Rik (RIKEN cDNA 4930447C04 gene)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : CUNH14orf39 (chromosome unknown C14orf39 homolog)
Pan paniscus (bonobo/pygmy chimpanzee) : C14H14orf39 (chromosome 14 C14orf39 homolog)
Canis lupus familiaris (dog) : C8H14orf39 (chromosome 8 C14orf39 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH14orf39 (chromosome unknown C14orf39 homolog)
Sus scrofa (pig) : C1H14orf39 (chromosome 1 C14orf39 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0695,761,718 - 95,797,314 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06105,199,542 - 105,234,535 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4695,303,860 - 95,338,272 (-)NCBIRGSC3.4rn4RGSC3.4
Celera690,043,192 - 90,079,162 (-)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Six6os1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1559456
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.