Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Traf7 (TNF receptor associated factor 7) Rattus norvegicus
Analyze
Symbol: Traf7
Name: TNF receptor associated factor 7
Description: Predicted to have ubiquitin-protein transferase activity. Predicted to be involved in several processes, including cellular response to interleukin-6; positive regulation of apoptotic signaling pathway; and regulation of protein modification process. Predicted to localize to several cellular components, including cytosol; perinuclear region of cytoplasm; and ubiquitin ligase complex. Orthologous to human TRAF7 (TNF receptor associated factor 7); INTERACTS WITH 2,4-dinitrotoluene; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E3 ubiquitin-protein ligase TRAF7; LOC360491; RGD1559653; similar to ring finger and WD repeat domain 1 isoform 1; Tnf receptor-associated factor 7; TNF receptor-associated factor 7, E3 ubiquitin protein ligase
Orthologs:
Homo sapiens (human) : TRAF7 (TNF receptor associated factor 7)  HGNC  Alliance
Mus musculus (house mouse) : Traf7 (TNF receptor-associated factor 7)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Traf7 (TNF receptor associated factor 7)
Pan paniscus (bonobo/pygmy chimpanzee) : TRAF7 (TNF receptor associated factor 7)
Canis lupus familiaris (dog) : TRAF7 (TNF receptor associated factor 7)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Traf7 (TNF receptor associated factor 7)
Sus scrofa (pig) : TRAF7 (TNF receptor associated factor 7)
Chlorocebus sabaeus (African green monkey) : TRAF7 (TNF receptor associated factor 7)
Heterocephalus glaber (naked mole-rat) : Traf7 (TNF receptor associated factor 7)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01013,874,444 - 13,893,090 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1013,874,456 - 13,892,997 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01013,691,429 - 13,710,062 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41013,760,687 - 13,779,228 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1013,213,849 - 13,232,354 (-)NCBICelera
Cytogenetic Map10q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Traf7
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1559653
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.