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Gene: Hmces (5-hydroxymethylcytosine binding, ES cell specific) Rattus norvegicus
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Symbol: Hmces
Name: 5-hydroxymethylcytosine binding, ES cell specific
Description: Predicted to have single-stranded DNA binding activity. Predicted to be involved in cellular response to DNA damage stimulus. Predicted to localize to the replication fork. Orthologous to human HMCES (5-hydroxymethylcytosine binding, ES cell specific); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 3-chloropropane-1,2-diol; oxaliplatin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 5-hydroxymethylcytosine (hmC) binding, ES cell-specific; abasic site processing protein HMCES; embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein; ES cell-specific 5hmC-binding protein; hypothetical protein LOC500251; LOC500251; peptidase HMCES; putative endonuclease HMCES; putative peptidase SRAPD1; SRAP domain-containing protein 1; UPF0361 protein C3orf37 homolog
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04119,841,088 - 119,864,115 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04185,088,893 - 185,111,627 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44122,136,275 - 122,154,853 (+)NCBIRGSC3.4rn4RGSC3.4
Celera4109,352,960 - 109,375,056 (+)NCBICelera
Cytogenetic Map4q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Hmces
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1559800
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.