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Gene: LOC294154 (similar to chromosome 6 open reading frame 106 isoform a) Rattus norvegicus
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Symbol: LOC294154
Name: similar to chromosome 6 open reading frame 106 isoform a
Description: Predicted to have ubiquitin binding activity. Predicted to be involved in macroautophagy. Predicted to localize to the autophagosome and phagophore assembly site. Orthologous to human ILRUN (inflammation and lipid regulator with UBA-like and NBR1-like domains); INTERACTS WITH 17beta-estradiol (ortholog); 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog); 2,2',5,5'-tetrachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: PREDICTED
Also known as: chromosome 6 open reading frame 106-like; hypothetical protein LOC294154; LOC294294; MGC124820; RGD1310148; similar to hypothetical protein MGC4614; uncharacterized protein C6orf106 homolog; uncharacterized protein LOC294154
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0207,331,321 - 7,397,588 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0209,533,329 - 9,599,034 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4205,965,992 - 6,033,724 (-)NCBIRGSC3.4rn4RGSC3.4
Celera207,371,306 - 7,437,251 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on LOC294154
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1559829
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.