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Gene: Agfg1 (ArfGAP with FG repeats 1) Rattus norvegicus
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Symbol: Agfg1
Name: ArfGAP with FG repeats 1
Description: Predicted to have DNA binding activity; GTPase activator activity; and metal ion binding activity. Predicted to be involved in acrosome assembly; intermediate filament organization; and spermatid nucleus differentiation. Predicted to localize to several cellular components, including the cytoplasmic vesicle; intracellular membrane-bounded organelle; and neuronal cell body. Orthologous to human AGFG1 (ArfGAP with FG repeats 1); PARTICIPATES IN influenza A pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 3,3',5,5'-tetrabromobisphenol A; 4,4'-diaminodiphenylmethane.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: arf-GAP domain and FG repeat-containing protein 1; arf-GAP domain and FG repeats-containing protein 1; HIV-1 Rev-binding protein homolog; LOC363266; MGC116375; nucleoporin-like protein RIP; similar to HIV-1 Rev binding protein
Orthologs:
Homo sapiens (human) : AGFG1 (ArfGAP with FG repeats 1)  HGNC  Alliance
Mus musculus (house mouse) : Agfg1 (ArfGAP with FG repeats 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Agfg1 (ArfGAP with FG repeats 1)
Pan paniscus (bonobo/pygmy chimpanzee) : AGFG1 (ArfGAP with FG repeats 1)
Canis lupus familiaris (dog) : AGFG1 (ArfGAP with FG repeats 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Agfg1 (ArfGAP with FG repeats 1)
Sus scrofa (pig) : AGFG1 (ArfGAP with FG repeats 1)
more info ...
Related Pseudogenes: Agfg1-ps1  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0988,607,508 - 88,663,486 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0988,354,885 - 88,410,590 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4982,162,480 - 82,216,301 (+)NCBIRGSC3.4rn4RGSC3.4
Celera981,565,840 - 81,618,403 (+)NCBICelera
Cytogenetic Map9q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Agfg1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1560041
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.