Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ndc1 (NDC1 transmembrane nucleoporin) Rattus norvegicus
Analyze
Symbol: Ndc1
Name: NDC1 transmembrane nucleoporin
Description: Predicted to be a structural constituent of nuclear pore. Predicted to be involved in several processes, including nuclear pore complex assembly; nuclear pore distribution; and synapsis. Predicted to localize to several cellular components, including the actin cytoskeleton; nuclear envelope; and plasma membrane. Orthologous to human NDC1 (NDC1 transmembrane nucleoporin); PARTICIPATES IN RNA transport pathway; INTERACTS WITH bisphenol A; flutamide; furan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC362557; LOC362557; nucleoporin NDC1; Tmem48; transmembrane protein 48
Orthologs:
Homo sapiens (human) : NDC1 (NDC1 transmembrane nucleoporin)  HGNC  Alliance
Mus musculus (house mouse) : Ndc1 (NDC1 transmembrane nucleoporin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ndc1 (NDC1 transmembrane nucleoporin)
Pan paniscus (bonobo/pygmy chimpanzee) : NDC1 (NDC1 transmembrane nucleoporin)
Canis lupus familiaris (dog) : NDC1 (NDC1 transmembrane nucleoporin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ndc1 (NDC1 transmembrane nucleoporin)
Sus scrofa (pig) : NDC1 (NDC1 transmembrane nucleoporin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05126,976,636 - 127,022,941 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05130,824,420 - 130,870,782 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45128,469,764 - 128,510,890 (+)NCBIRGSC3.4rn4RGSC3.4
Celera5120,901,680 - 120,945,858 (+)NCBICelera
Cytogenetic Map5q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ndc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1560173
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.