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Gene: Ccdc78 (coiled-coil domain containing 78) Rattus norvegicus
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Symbol: Ccdc78
Name: coiled-coil domain containing 78
Description: Predicted to be involved in de novo centriole assembly involved in multi-ciliated epithelial cell differentiation and skeletal muscle contraction. Predicted to localize to the cytoplasm; deuterosome; and sarcolemma. Human ortholog(s) of this gene implicated in centronuclear myopathy. Orthologous to human CCDC78 (coiled-coil domain containing 78); INTERACTS WITH 1,2-dimethylhydrazine; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: coiled-coil domain-containing protein 78; LOC302996; RGD1560244; similar to hypothetical protein FLJ34512
Orthologs:
Homo sapiens (human) : CCDC78 (coiled-coil domain containing 78)  HGNC  Alliance
Mus musculus (house mouse) : Ccdc78 (coiled-coil domain containing 78)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ccdc78 (coiled-coil domain containing 78)
Pan paniscus (bonobo/pygmy chimpanzee) : CCDC78 (coiled-coil domain containing 78)
Canis lupus familiaris (dog) : CCDC78 (coiled-coil domain containing 78)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ccdc78 (coiled-coil domain containing 78)
Sus scrofa (pig) : CCDC78 (coiled-coil domain containing 78)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01015,155,839 - 15,160,039 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01014,969,092 - 14,972,982 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41015,052,949 - 15,064,350 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1014,477,059 - 14,481,260 (+)NCBICelera
Cytogenetic Map10q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ccdc78
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1560244
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.