Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Agbl1 (ATP/GTP binding protein-like 1) Rattus norvegicus
Analyze
Symbol: Agbl1
Name: ATP/GTP binding protein-like 1
Description: Predicted to have metallocarboxypeptidase activity and tubulin binding activity. Predicted to be involved in C-terminal protein deglutamylation and protein side chain deglutamylation. Human ortholog(s) of this gene implicated in Fuchs' endothelial dystrophy. Orthologous to human AGBL1 (ATP/GTP binding protein like 1); INTERACTS WITH atrazine; bisphenol A; copper atom.
Type: protein-coding
RefSeq Status: MODEL
Also known as: cytosolic carboxypeptidase 4; LOC308724; RGD1560280; similar to hypothetical protein D430020F16
Orthologs:
Homo sapiens (human) : AGBL1 (ATP/GTP binding protein like 1)  HGNC  Alliance
Mus musculus (house mouse) : Agbl1 (ATP/GTP binding protein-like 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Agbl1 (ATP/GTP binding protein like 1)
Pan paniscus (bonobo/pygmy chimpanzee) : AGBL1 (ATP/GTP binding protein like 1)
Canis lupus familiaris (dog) : AGBL1 (ATP/GTP binding protein like 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Agbl1 (ATP/GTP binding protein like 1)
Sus scrofa (pig) : AGBL1 (ATP/GTP binding protein like 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01137,798,862 - 138,711,126 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01138,789,634 - 139,710,124 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41131,756,893 - 131,944,875 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1122,147,459 - 123,040,161 (+)NCBICelera
Cytogenetic Map1q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Agbl1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1560280
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.