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Gene: Sntg1 (syntrophin, gamma 1) Rattus norvegicus
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Symbol: Sntg1
Name: syntrophin, gamma 1
Description: Predicted to have protein C-terminus binding activity. Predicted to localize to several cellular components, including cytoskeleton; dystrophin-associated glycoprotein complex; and ruffle membrane. Orthologous to human SNTG1 (syntrophin gamma 1); INTERACTS WITH 17beta-estradiol; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: gamma-1-syntrophin; LOC102556371; LOC500394; RGD1560290; similar to syntrophin, gamma 1; uncharacterized LOC102556371
Orthologs:
Homo sapiens (human) : SNTG1 (syntrophin gamma 1)  HGNC  Alliance
Mus musculus (house mouse) : Sntg1 (syntrophin, gamma 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sntg1 (syntrophin gamma 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SNTG1 (syntrophin gamma 1)
Canis lupus familiaris (dog) : SNTG1 (syntrophin gamma 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sntg1 (syntrophin gamma 1)
Sus scrofa (pig) : SNTG1 (syntrophin gamma 1)
Chlorocebus sabaeus (African green monkey) : SNTG1 (syntrophin gamma 1)
Heterocephalus glaber (naked mole-rat) : Sntg1 (syntrophin gamma 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0510,118,901 - 10,493,094 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl510,178,302 - 10,493,094 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0515,039,209 - 15,286,329 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4510,043,321 - 10,418,211 (+)NCBIRGSC3.4rn4RGSC3.4
Celera59,933,073 - 10,291,832 (+)NCBICelera
Cytogenetic Map5q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sntg1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1560290
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.