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Gene: RGD1560394 (RGD1560394) Rattus norvegicus
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Symbol: RGD1560394
Name: RGD1560394
CRRD ID: 1560394
Description: Predicted to localize to extracellular region. Orthologous to human C4orf48 (chromosome 4 open reading frame 48); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; 17beta-estradiol (ortholog).
Type: protein-coding
RefSeq Status: PREDICTED
Also known as: hypothetical LOC289728; hypothetical protein LOC289728; LOC289728; neuropeptide-like protein C4orf48 homolog; uncharacterized protein LOC289728
Orthologs:
Homo sapiens (human) : C4orf48 (chromosome 4 open reading frame 48)  HGNC  Alliance
Mus musculus (house mouse) : Gm1673 (predicted gene 1673)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : CUNH4orf48 (chromosome unknown C4orf48 homolog)
Pan paniscus (bonobo/pygmy chimpanzee) : C4H4orf48 (chromosome 4 C4orf48 homolog)
Canis lupus familiaris (dog) : C3H4orf48 (chromosome 3 C4orf48 homolog)
Sus scrofa (pig) : C8H4orf48 (chromosome 8 C4orf48 homolog)
Chlorocebus sabaeus (African green monkey) : C27H4orf48 (chromosome 27 C4orf48 homolog)
Heterocephalus glaber (naked mole-rat) : CUNH4orf48 (chromosome unknown C4orf48 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01482,053,684 - 82,055,290 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1482,053,685 - 82,055,290 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01482,737,924 - 82,739,530 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41482,462,073 - 82,463,678 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1475,691,720 - 75,693,325 (-)NCBICelera
Cytogenetic Map14q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on RGD1560394
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1560394
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-11-24
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.