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Gene: Esrp1 (epithelial splicing regulatory protein 1) Rattus norvegicus
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Symbol: Esrp1
Name: epithelial splicing regulatory protein 1
Description: Predicted to have mRNA binding activity. Predicted to be involved in several processes, including alternative mRNA splicing, via spliceosome; morphogenesis of a branching epithelium; and regulation of inner ear auditory receptor cell fate specification. Predicted to localize to the nuclear body. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness. Orthologous to human ESRP1 (epithelial splicing regulatory protein 1); INTERACTS WITH amphetamine; bisphenol A; DDT.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC500409; RGD1560481; RNA-binding motif protein 35A; RNA-binding protein 35A; similar to hypothetical protein FLJ20171
Orthologs:
Homo sapiens (human) : ESRP1 (epithelial splicing regulatory protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Esrp1 (epithelial splicing regulatory protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Esrp1 (epithelial splicing regulatory protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ESRP1 (epithelial splicing regulatory protein 1)
Canis lupus familiaris (dog) : ESRP1 (epithelial splicing regulatory protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Esrp1 (epithelial splicing regulatory protein 1)
Sus scrofa (pig) : ESRP1 (epithelial splicing regulatory protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0524,576,988 - 24,631,758 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl524,576,991 - 24,631,698 (-)Ensembl
Rnor_5.0529,302,577 - 29,357,299 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4525,175,774 - 25,229,179 (-)NCBIRGSC3.4rn4RGSC3.4
Celera523,646,895 - 23,700,274 (-)NCBICelera
Cytogenetic Map5q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Esrp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1560481
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.