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Gene: Vps41 (VPS41 subunit of HOPS complex) Rattus norvegicus
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Symbol: Vps41
Name: VPS41 subunit of HOPS complex
Description: Exhibits protein self-association. Involved in regulated exocytosis. Localizes to the Golgi-associated vesicle. Colocalizes with the AP-3 adaptor complex. Orthologous to human VPS41 (VPS41 subunit of HOPS complex); INTERACTS WITH (+)-schisandrin B; acrylamide; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC306991; LOC306991; RGD1560511; similar to Vps41 protein; vacuolar protein sorting 41 homolog; vacuolar protein sorting 41 homolog (S. cerevisiae); vacuolar protein sorting-associated protein 41 homolog; Vam2; VPS41 HOPS complex subunit
Orthologs:
Homo sapiens (human) : VPS41 (VPS41 subunit of HOPS complex)  HGNC  Alliance
Mus musculus (house mouse) : Vps41 (VPS41 HOPS complex subunit)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vps41 (VPS41 subunit of HOPS complex)
Pan paniscus (bonobo/pygmy chimpanzee) : VPS41 (VPS41 subunit of HOPS complex)
Canis lupus familiaris (dog) : VPS41 (VPS41 subunit of HOPS complex)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vps41 (VPS41 subunit of HOPS complex)
Sus scrofa (pig) : VPS41 (VPS41 subunit of HOPS complex)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01748,643,754 - 48,810,633 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01746,702,308 - 46,866,329 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41753,893,474 - 54,063,005 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1742,165,613 - 42,324,736 (-)NCBICelera
Cytogenetic Map17q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Vps41
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1560511
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.