Gene: Phf21a (PHD finger protein 21A) Rattus norvegicus
Analyze
Symbol: Phf21a
Name: PHD finger protein 21A
Description: Exhibits chromatin binding activity; predicted to be involved in negative regulation of transcription by RNA polymerase II and suckling behavior; localizes to the nucleus; orthologous to human PHF21A (PHD finger protein 21A); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC362166; RGD1560612; similar to PHF21A protein
Orthologs:
Homo sapiens (human) : PHF21A (PHD finger protein 21A)  HGNC  Alliance
Mus musculus (house mouse) : Phf21a (PHD finger protein 21A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Phf21a (PHD finger protein 21A)
Pan paniscus (bonobo/pygmy chimpanzee) : PHF21A (PHD finger protein 21A)
Canis lupus familiaris (dog) : PHF21A (PHD finger protein 21A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Phf21a (PHD finger protein 21A)
Sus scrofa (pig) : PHF21A (PHD finger protein 21A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0381,099,765 - 81,271,841 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0387,803,380 - 87,979,083 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4376,583,850 - 76,759,238 (+)NCBIRGSC3.4rn4RGSC3.4
Celera377,360,760 - 77,537,633 (+)NCBICelera
Cytogenetic Map3q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Phf21a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1560612
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.