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Gene: Zkscan1 (zinc finger with KRAB and SCAN domains 1) Rattus norvegicus
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Symbol: Zkscan1
Name: zinc finger with KRAB and SCAN domains 1
CRRD ID: 1560616
Description: Predicted to have DNA binding activity; DNA-binding transcription factor activity; and metal ion binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to nucleus. Orthologous to human ZKSCAN1 (zinc finger with KRAB and SCAN domains 1); INTERACTS WITH 1-naphthyl isothiocyanate; acetamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC116363; zinc finger protein 36 (KOX 18); zinc finger protein with KRAB and SCAN domains 1
Orthologs:
Homo sapiens (human) : ZKSCAN1 (zinc finger with KRAB and SCAN domains 1)  HGNC  Alliance
Mus musculus (house mouse) : Zkscan1 (zinc finger with KRAB and SCAN domains 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Zkscan1 (zinc finger with KRAB and SCAN domains 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ZKSCAN1 (zinc finger with KRAB and SCAN domains 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Zkscan1 (zinc finger with KRAB and SCAN domains 1)
Sus scrofa (pig) : ZKSCAN1 (zinc finger with KRAB and SCAN domains 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01219,231,092 - 19,247,393 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1219,231,092 - 19,247,387 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01221,289,534 - 21,310,622 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41217,530,383 - 17,546,785 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1218,897,020 - 18,913,306 (+)NCBICelera
Cytogenetic Map12q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Zkscan1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1560616
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.