Gene: Lims1 (LIM zinc finger domain containing 1) Rattus norvegicus
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Symbol: Lims1
Name: LIM zinc finger domain containing 1
Description: Predicted to have protein kinase binding activity and zinc ion binding activity; involved in protein heterooligomerization; localizes to the protein-containing complex; orthologous to human LIMS1 (LIM zinc finger domain containing 1); PARTICIPATES IN integrin mediated signaling pathway; INTERACTS WITH 2,6-dinitrotoluene; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LIM and senescent cell antigen-like domains 1; LIM and senescent cell antigen-like-containing domain protein 1; LIM-type zinc finger domains 1; LOC499443; Pinch1; RGD1560732; similar to LIM and senescent cell antigen-like domains 1
Orthologs:
Homo sapiens (human) : LIMS1 (LIM zinc finger domain containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Lims1 (LIM and senescent cell antigen-like domains 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lims1 (LIM zinc finger domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : LIMS1 (LIM zinc finger domain containing 1)
Canis lupus familiaris (dog) : LIMS1 (LIM zinc finger domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lims1 (LIM zinc finger domain containing 1)
Sus scrofa (pig) : LIMS1 (LIM zinc finger domain containing 1)
more info ...
Allele / Splice: Lims1Tn(sb-T2/Bart3)2.169Mcwi  
Genetic Models: F344-Lims1Tn(sb-T2/Bart3)2.169Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02027,895,981 - 28,004,767 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02029,715,580 - 29,824,252 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42037,349,188 - 37,397,427 (-)NCBIRGSC3.4rn4RGSC3.4
Celera2027,819,971 - 27,867,155 (+)NCBICelera
Cytogenetic Map20q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Lims1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1560732
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.