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Gene: Arid3c (AT-rich interaction domain 3C) Rattus norvegicus
Symbol: Arid3c
Name: AT-rich interaction domain 3C
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and chromatin binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to localize to cytoplasm; membrane raft; and nucleus. Orthologous to human ARID3C (AT-rich interaction domain 3C); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; arsane (ortholog).
Type: protein-coding
RefSeq Status: INFERRED
Also known as: AT rich interactive domain 3C (BRIGHT-like); AT-rich interactive domain-containing protein 3C; LOC502946; RGD1560943; similar to hypothetical LOC496519
Homo sapiens (human) : ARID3C (AT-rich interaction domain 3C)  HGNC  Alliance
Mus musculus (house mouse) : Arid3c (AT rich interactive domain 3C (BRIGHT-like))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Arid3c (AT-rich interaction domain 3C)
Pan paniscus (bonobo/pygmy chimpanzee) : ARID3C (AT-rich interaction domain 3C)
Canis lupus familiaris (dog) : ARID3C (AT-rich interaction domain 3C)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Arid3c (AT-rich interaction domain 3C)
Sus scrofa (pig) : ARID3C (AT-rich interaction domain 3C)
Heterocephalus glaber (naked mole-rat) : Arid3c (AT-rich interaction domain 3C)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0558,107,182 - 58,114,632 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl558,107,707 - 58,113,553 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0562,631,772 - 62,637,618 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4559,148,421 - 59,154,267 (-)NCBIRGSC3.4rn4RGSC3.4
Celera555,484,083 - 55,489,929 (-)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)

References - curated
References - uncurated


Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Arid3c
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1560943
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.