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Gene: Gtf2h5 (general transcription factor IIH subunit 5) Rattus norvegicus
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Symbol: Gtf2h5
Name: general transcription factor IIH subunit 5
Description: Predicted to be involved in cellular response to gamma radiation; nucleic acid metabolic process; and phosphorylation of RNA polymerase II C-terminal domain. Predicted to localize to nucleus. Human ortholog(s) of this gene implicated in photosensitive trichothiodystrophy 3. Orthologous to human GTF2H5 (general transcription factor IIH subunit 5); PARTICIPATES IN RNA polymerase II transcription initiation pathway; nucleotide excision repair pathway; INTERACTS WITH 5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole; 6-propyl-2-thiouracil; amiodarone.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: general transcription factor IIH, polypeptide 5; LOC502227; RGD1560991; similar to general transcription factor IIH, polypeptide 5
Orthologs:
Homo sapiens (human) : GTF2H5 (general transcription factor IIH subunit 5)  HGNC  Alliance
Mus musculus (house mouse) : Gtf2h5 (general transcription factor IIH, polypeptide 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gtf2h5 (general transcription factor IIH subunit 5)
Pan paniscus (bonobo/pygmy chimpanzee) : GTF2H5 (general transcription factor IIH subunit 5)
Canis lupus familiaris (dog) : GTF2H5 (general transcription factor IIH subunit 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gtf2h5 (general transcription factor IIH subunit 5)
Sus scrofa (pig) : GTF2H5 (general transcription factor IIH subunit 5)
Heterocephalus glaber (naked mole-rat) : Gtf2h5 (general transcription factor IIH subunit 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0146,978,345 - 46,985,032 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl146,978,458 - 46,985,032 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0148,280,850 - 48,287,542 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4140,858,997 - 40,865,571 (+)NCBIRGSC3.4rn4RGSC3.4
Celera142,346,319 - 42,352,893 (+)NCBICelera
Cytogenetic Map1q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Gtf2h5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1560991
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-07-28
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.