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Gene: Ammecr1 (AMMECR nuclear protein 1) Rattus norvegicus
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Symbol: Ammecr1
Name: AMMECR nuclear protein 1
Description: Predicted to localize to mitochondrion and nucleoplasm. Orthologous to human AMMECR1 (AMMECR nuclear protein 1); INTERACTS WITH bisphenol A; (+)-catechin (ortholog); (-)-epigallocatechin 3-gallate (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1; LOC501539; RGD1561004; similar to AMME syndrome candidate gene 1 protein homolog
Orthologs:
Homo sapiens (human) : AMMECR1 (AMMECR nuclear protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Ammecr1 (Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ammecr1 (AMMECR nuclear protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : AMMECR1 (AMMECR nuclear protein 1)
Canis lupus familiaris (dog) : AMMECR1 (AMMECR nuclear protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ammecr1 (AMMECR nuclear protein 1)
Sus scrofa (pig) : AMMECR1 (AMMECR nuclear protein 1)
Chlorocebus sabaeus (African green monkey) : AMMECR1 (AMMECR nuclear protein 1)
Heterocephalus glaber (naked mole-rat) : Ammecr1 (AMMECR nuclear protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X114,129,829 - 114,233,013 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX114,131,898 - 114,232,939 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X112,575,812 - 112,679,260 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X35,588,998 - 35,691,478 (+)NCBIRGSC3.4rn4RGSC3.4
CeleraX105,881,340 - 105,983,582 (-)NCBICelera
Cytogenetic MapXq33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ammecr1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1561004
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.