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Gene: Cc2d2a (coiled-coil and C2 domain containing 2A) Rattus norvegicus
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Symbol: Cc2d2a
Name: coiled-coil and C2 domain containing 2A
Description: Predicted to be involved in several processes, including animal organ development; cilium assembly; and protein localization to ciliary transition zone. Predicted to localize to MKS complex. Human ortholog(s) of this gene implicated in COACH syndrome; Joubert syndrome 9; Meckel syndrome 6; and intellectual disability. Orthologous to human CC2D2A (coiled-coil and C2 domain containing 2A); INTERACTS WITH bisphenol A; cisplatin; cobalt dichloride.
Type: protein-coding
RefSeq Status: MODEL
Also known as: coiled-coil and C2 domain-containing protein 2A; LOC498386; RGD1561042; similar to RIKEN cDNA 5730509K17 gene
Orthologs:
Homo sapiens (human) : CC2D2A (coiled-coil and C2 domain containing 2A)  HGNC  Alliance
Mus musculus (house mouse) : Cc2d2a (coiled-coil and C2 domain containing 2A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cc2d2a (coiled-coil and C2 domain containing 2A)
Pan paniscus (bonobo/pygmy chimpanzee) : CC2D2A (coiled-coil and C2 domain containing 2A)
Canis lupus familiaris (dog) : CC2D2A (coiled-coil and C2 domain containing 2A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cc2d2a (coiled-coil and C2 domain containing 2A)
Sus scrofa (pig) : CC2D2A (coiled-coil and C2 domain containing 2A)
Chlorocebus sabaeus (African green monkey) : CC2D2A (coiled-coil and C2 domain containing 2A)
Heterocephalus glaber (naked mole-rat) : Cc2d2a (coiled-coil and C2 domain containing 2A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01471,895,128 - 71,979,452 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1471,895,246 - 71,973,419 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01471,922,693 - 72,005,867 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41472,514,369 - 72,593,323 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1466,307,068 - 66,391,488 (-)NCBICelera
Cytogenetic Map14q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Cc2d2a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1561042
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-07-28
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.