Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: RGD1561113 (similar to Hypothetical UPF0184 protein C9orf16 homolog) Rattus norvegicus
Analyze
Symbol: RGD1561113
Name: similar to Hypothetical UPF0184 protein C9orf16 homolog
Description: Orthologous to human C9orf16 (chromosome 9 open reading frame 16); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; cyclosporin A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC499780; LOW QUALITY PROTEIN: UPF0184 protein C9orf16 homolog; UPF0184 protein C9orf16 homolog
Orthologs:
Homo sapiens (human) : C9orf16 (chromosome 9 open reading frame 16)  HGNC  Alliance
Mus musculus (house mouse) : 1110008P14Rik (RIKEN cDNA 1110008P14 gene)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102021188 (chromosome unknown open reading frame, human C9orf16)
Pan paniscus (bonobo/pygmy chimpanzee) : C9H9orf16 (chromosome 9 C9orf16 homolog)
Canis lupus familiaris (dog) : C9H9orf16 (chromosome 9 C9orf16 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH9orf16 (chromosome unknown C9orf16 homolog)
Sus scrofa (pig) : C1H9orf16 (chromosome 1 C9orf16 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0311,408,076 - 11,410,907 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0316,756,949 - 16,759,766 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4311,505,289 - 11,508,067 (-)NCBIRGSC3.4rn4RGSC3.4
Celera310,417,463 - 10,420,299 (-)NCBICelera
Cytogenetic Map3p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on RGD1561113
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1561113
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.