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Gene: Dcp1a (decapping mRNA 1A) Rattus norvegicus
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Symbol: Dcp1a
Name: decapping mRNA 1A
Description: Exhibits kinesin binding activity. Predicted to be involved in deadenylation-dependent decapping of nuclear-transcribed mRNA; deadenylation-independent decapping of nuclear-transcribed mRNA; and protein localization to cytoplasmic stress granule. Predicted to localize to the P-body. Orthologous to human DCP1A (decapping mRNA 1A); PARTICIPATES IN RNA degradation pathway; INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; bisphenol A; 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: DCP1 decapping enzyme homolog A (S. cerevisiae); LOC361109; mRNA-decapping enzyme 1A; RGD1561298; similar to transcription factor; test2
Orthologs:
Homo sapiens (human) : DCP1A (decapping mRNA 1A)  HGNC  Alliance
Mus musculus (house mouse) : Dcp1a (decapping mRNA 1A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Dcp1a (decapping mRNA 1A)
Pan paniscus (bonobo/pygmy chimpanzee) : DCP1A (decapping mRNA 1A)
Canis lupus familiaris (dog) : DCP1A (decapping mRNA 1A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Dcp1a (decapping mRNA 1A)
Sus scrofa (pig) : DCP1A (decapping mRNA 1A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0166,542,415 - 6,583,856 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0166,476,320 - 6,517,715 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4165,840,678 - 5,883,381 (+)NCBIRGSC3.4rn4RGSC3.4
Celera169,490,489 - 9,531,406 (-)NCBICelera
Cytogenetic Map16p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Dcp1a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1561298
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.