Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Slitrk2 (SLIT and NTRK-like family, member 2) Rattus norvegicus
Analyze
Symbol: Slitrk2
Name: SLIT and NTRK-like family, member 2
Description: Predicted to be involved in axonogenesis; regulation of synapse assembly; and synaptic membrane adhesion. Localizes to the integral component of postsynaptic membrane. Orthologous to human SLITRK2 (SLIT and NTRK like family member 2); INTERACTS WITH 17alpha-ethynylestradiol; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC309349; RGD1561361; similar to neuronal transmembrane protein Slitrk2; SLIT and NTRK-like protein 2
Orthologs:
Homo sapiens (human) : SLITRK2 (SLIT and NTRK like family member 2)  HGNC  Alliance
Mus musculus (house mouse) : Slitrk2 (SLIT and NTRK-like family, member 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slitrk2 (SLIT and NTRK like family member 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SLITRK2 (SLIT and NTRK like family member 2)
Canis lupus familiaris (dog) : SLITRK2 (SLIT and NTRK like family member 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slitrk2 (SLIT and NTRK like family member 2)
Sus scrofa (pig) : SLITRK2 (SLIT and NTRK like family member 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X151,099,388 - 151,111,816 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X151,095,085 - 151,108,778 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X152,668,556 - 152,671,996 (+)NCBIRGSC3.4rn4RGSC3.4
CeleraX141,105,289 - 141,108,729 (+)NCBICelera
Cytogenetic MapXq37NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Slitrk2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1561361
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.