Gene: Gata5 (GATA binding protein 5) Rattus norvegicus
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Symbol: Gata5
Name: GATA binding protein 5
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific, RNA polymerase II proximal promoter sequence-specific DNA binding activity, and enhancer sequence-specific DNA binding activity; predicted to be involved in several processes, including animal organ development, cellular response to BMP stimulus, and intestinal epithelial cell differentiation; predicted to localize to the nuclear chromatin; orthologous to human GATA5 (GATA binding protein 5); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; hydrogen peroxide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: GATA-binding protein 5; LOC499951; similar to Transcription factor GATA-5 (GATA binding factor-5); transcription factor GATA-5
Orthologs:
Homo sapiens (human) : GATA5 (GATA binding protein 5)  HGNC  Alliance
Mus musculus (house mouse) : Gata5 (GATA binding protein 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gata5 (GATA binding protein 5)
Pan paniscus (bonobo/pygmy chimpanzee) : GATA5 (GATA binding protein 5)
Canis lupus familiaris (dog) : GATA5 (GATA binding protein 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gata5 (GATA binding protein 5)
Sus scrofa (pig) : GATA5 (GATA binding protein 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03175,701,278 - 175,709,465 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03181,406,297 - 181,414,484 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43169,385,321 - 169,393,508 (-)NCBIRGSC3.4rn4RGSC3.4
Celera3165,153,452 - 165,161,639 (+)NCBICelera
Cytogenetic Map3q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Gata5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1561365
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.