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Gene: RGD1561415 (RGD1561415) Rattus norvegicus
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Symbol: RGD1561415
Name: RGD1561415
Description: Orthologous to human C16orf86 (chromosome 16 open reading frame 86); INTERACTS WITH bisphenol A; 2-hydroxypropanoic acid (ortholog); aflatoxin B2 (ortholog).
Type: protein-coding
RefSeq Status: PREDICTED
Also known as: hypothetical protein LOC498943; LOC498943; uncharacterized protein C16orf86 homolog
Orthologs:
Homo sapiens (human) : C16orf86 (chromosome 16 open reading frame 86)  HGNC  Alliance
Mus musculus (house mouse) : 4933405L10Rik (RIKEN cDNA 4933405L10 gene)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102025688 (chromosome unknown open reading frame, human C16orf86)
Pan paniscus (bonobo/pygmy chimpanzee) : C16H16orf86 (chromosome 16 C16orf86 homolog)
Canis lupus familiaris (dog) : C5H16orf86 (chromosome 5 C16orf86 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH16orf86 (chromosome unknown C16orf86 homolog)
Sus scrofa (pig) : C6H16orf86 (chromosome 6 C16orf86 homolog)
Chlorocebus sabaeus (African green monkey) : C5H16orf86 (chromosome 5 open reading frame, human C16orf86)
Heterocephalus glaber (naked mole-rat) : CUNH16orf86 (chromosome unknown C16orf86 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01937,675,166 - 37,677,280 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1937,675,113 - 37,677,073 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01948,541,407 - 48,543,997 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41935,540,429 - 35,542,338 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1933,024,563 - 33,026,472 (+)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
References - curated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on RGD1561415
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1561415
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.