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Gene: Afg1l (AFG1 like ATPase) Rattus norvegicus
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Symbol: Afg1l
Name: AFG1 like ATPase
Description: Predicted to have ATPase activity. Predicted to be involved in mitochondrial electron transport, cytochrome c to oxygen and mitochondrial protein catabolic process. Predicted to localize to the mitochondrial membrane. Orthologous to human AFG1L (AFG1 like ATPase); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; bisphenol A; mercury dichloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: AFG1-like ATPase; Lace1; lactation elevated 1; lactation elevated protein 1; LOC502479; MGC124994; similar to lactation elevated 1
Orthologs:
Homo sapiens (human) : AFG1L (AFG1 like ATPase)  HGNC  Alliance
Mus musculus (house mouse) : Afg1l (AFG1 like ATPase)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Afg1l (AFG1 like ATPase)
Pan paniscus (bonobo/pygmy chimpanzee) : AFG1L (AFG1 like ATPase)
Canis lupus familiaris (dog) : AFG1L (AFG1 like ATPase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Afg1l (AFG1 like ATPase)
Sus scrofa (pig) : AFG1L (AFG1 like ATPase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02047,038,824 - 47,208,812 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02048,714,679 - 48,877,546 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42046,296,402 - 46,302,522 (-)NCBIRGSC3.4rn4RGSC3.4
Celera2054,003,540 - 54,168,475 (+)NCBICelera
Cytogenetic Map20q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Afg1l
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1561501
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.