Gene: Atxn1l (ataxin 1-like) Rattus norvegicus
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Symbol: Atxn1l
Name: ataxin 1-like
Description: Predicted to be involved in several processes, including animal organ development, extracellular matrix organization, and learning or memory; predicted to colocalize with the nucleoplasm; orthologous to human ATXN1L (ataxin 1 like); INTERACTS WITH 1-naphthyl isothiocyanate; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
Also known as: ataxin-1-like; LOC307970; RGD1561758; similar to Ataxin-1 (Spinocerebellar ataxia type 1 protein homolog)
Orthologs:
Homo sapiens (human) : ATXN1L (ataxin 1 like)  HGNC  Alliance
Mus musculus (house mouse) : Atxn1l (ataxin 1-like)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atxn1l (ataxin 1 like)
Pan paniscus (bonobo/pygmy chimpanzee) : ATXN1L (ataxin 1 like)
Canis lupus familiaris (dog) : ATXN1L (ataxin 1 like)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atxn1l (ataxin 1 like)
Sus scrofa (pig) : ATXN1L (ataxin 1 like)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01941,932,356 - 41,939,456 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01952,753,213 - 52,764,360 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41939,610,747 - 39,612,786 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1937,104,106 - 37,111,198 (-)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Atxn1l
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1561758
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.