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Gene: Ccdc117 (coiled-coil domain containing 117) Rattus norvegicus
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Symbol: Ccdc117
Name: coiled-coil domain containing 117
CRRD ID: 1561762
Description: Orthologous to human CCDC117 (coiled-coil domain containing 117); INTERACTS WITH 1,3-dinitrobenzene; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: coiled-coil domain-containing protein 117; LOC498404; similar to cDNA sequence BC018601
Orthologs:
Homo sapiens (human) : CCDC117 (coiled-coil domain containing 117)  HGNC  Alliance
Mus musculus (house mouse) : Ccdc117 (coiled-coil domain containing 117)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ccdc117 (coiled-coil domain containing 117)
Pan paniscus (bonobo/pygmy chimpanzee) : CCDC117 (coiled-coil domain containing 117)
Canis lupus familiaris (dog) : CCDC117 (coiled-coil domain containing 117)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ccdc117 (coiled-coil domain containing 117)
Sus scrofa (pig) : CCDC117 (coiled-coil domain containing 117)
Chlorocebus sabaeus (African green monkey) : CCDC117 (coiled-coil domain containing 117)
Heterocephalus glaber (naked mole-rat) : Ccdc117 (coiled-coil domain containing 117)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01485,763,396 - 85,772,762 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1485,763,397 - 85,772,762 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01486,433,499 - 86,442,865 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41486,161,551 - 86,170,917 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1479,285,994 - 79,295,359 (-)NCBICelera
Cytogenetic Map14q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ccdc117
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1561762
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.