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Gene: Efcab7 (EF-hand calcium binding domain 7) Rattus norvegicus
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Symbol: Efcab7
Name: EF-hand calcium binding domain 7
Description: Predicted to have calcium ion binding activity. Predicted to be involved in positive regulation of protein import into nucleus; positive regulation of protein localization to ciliary membrane; and positive regulation of transcription by RNA polymerase II. Predicted to localize to the ciliary membrane; extrinsic component of membrane; and plasma membrane protein complex. Orthologous to human EFCAB7 (EF-hand calcium binding domain 7); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,2',4,4'-Tetrabromodiphenyl ether; oxaliplatin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: EF-hand calcium-binding domain-containing protein 7; LOC362549; RGD1561825; similar to CDNA sequence BC020077
Orthologs:
Homo sapiens (human) : EFCAB7 (EF-hand calcium binding domain 7)  HGNC  Alliance
Mus musculus (house mouse) : Efcab7 (EF-hand calcium binding domain 7)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Efcab7 (EF-hand calcium binding domain 7)
Pan paniscus (bonobo/pygmy chimpanzee) : EFCAB7 (EF-hand calcium binding domain 7)
Canis lupus familiaris (dog) : EFCAB7 (EF-hand calcium binding domain 7)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Efcab7 (EF-hand calcium binding domain 7)
Sus scrofa (pig) : EFCAB7 (EF-hand calcium binding domain 7)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05118,673,835 - 118,724,581 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05122,591,957 - 122,629,531 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.05122,470,265 - 122,472,469 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45120,525,527 - 120,576,068 (+)NCBIRGSC3.4rn4RGSC3.4
Celera5113,073,505 - 113,124,027 (+)NCBICelera
Cytogenetic Map5q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Efcab7
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1561825
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.