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Gene: Sprn (shadow of prion protein) Rattus norvegicus
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Symbol: Sprn
Name: shadow of prion protein
Description: Predicted to have nucleic acid binding activity. Predicted to be involved in protein import into nucleus. Predicted to localize to several cellular components, including cytosol; nucleolus; and vesicle. Orthologous to human SPRN (shadow of prion protein); INTERACTS WITH 17beta-estradiol; bisphenol A; lead diacetate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Shadoo; shadow of prion protein homolog; shadow of prion protein homolog (zebrafish)
Orthologs:
Homo sapiens (human) : SPRN (shadow of prion protein)  HGNC  Alliance
Mus musculus (house mouse) : Sprn (shadow of prion protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sprn (shadow of prion protein)
Pan paniscus (bonobo/pygmy chimpanzee) : SPRN (shadow of prion protein)
Canis lupus familiaris (dog) : SPRN (shadow of prion protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sprn (shadow of prion protein)
Sus scrofa (pig) : SPRN (shadow of prion protein)
Chlorocebus sabaeus (African green monkey) : SPRN (shadow of prion protein)
Heterocephalus glaber (naked mole-rat) : Sprn (shadow of prion protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01212,619,817 - 212,623,686 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1212,622,094 - 212,622,537 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01219,534,729 - 219,538,091 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41199,953,310 - 199,953,753 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1192,624,165 - 192,624,608 (-)NCBICelera
Cytogenetic Map1q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sprn
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1561845
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.