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Gene: Ap5s1 (adaptor related protein complex 5 subunit sigma 1) Rattus norvegicus
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Symbol: Ap5s1
Name: adaptor related protein complex 5 subunit sigma 1
Description: Predicted to be involved in double-strand break repair via homologous recombination and endosomal transport. Predicted to localize to several cellular components, including AP-type membrane coat adaptor complex; late endosome; and lysosome. Orthologous to human AP5S1 (adaptor related protein complex 5 subunit sigma 1); INTERACTS WITH bisphenol A; N-methyl-4-phenylpyridinium; (-)-epigallocatechin 3-gallate (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: adaptor-related protein complex 5, sigma 1 subunit; AP-5 complex subunit sigma-1; hypothetical protein LOC499893; LOC499893; RGD1561852; similar to Protein C20orf29
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03123,754,035 - 123,757,349 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3123,754,057 - 123,757,359 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03130,251,640 - 130,255,035 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43118,916,234 - 118,919,526 (+)NCBIRGSC3.4rn4RGSC3.4
Celera3117,237,741 - 117,241,033 (+)NCBICelera
Cytogenetic Map3q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ap5s1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1561852
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.