Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Muc5b (mucin 5B, oligomeric mucus/gel-forming) Rattus norvegicus
Analyze
Symbol: Muc5b
Name: mucin 5B, oligomeric mucus/gel-forming
Description: Predicted to be involved in defense response to bacterium and regulation of macrophage activation. Predicted to localize to the extracellular space and intracellular membrane-bounded organelle. Biomarker of nasopharynx carcinoma. Human ortholog(s) of this gene implicated in bronchiolitis; idiopathic pulmonary fibrosis; and urinary bladder cancer. Orthologous to human MUC5B (mucin 5B, oligomeric mucus/gel-forming); INTERACTS WITH C60 fullerene; vinclozolin; 17beta-estradiol (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC309114; mucin-5B; RGD1561983; similar to Muc5b protein
Orthologs:
Homo sapiens (human) : MUC5B (mucin 5B, oligomeric mucus/gel-forming)  HGNC  Alliance
Mus musculus (house mouse) : Muc5b (mucin 5, subtype B, tracheobronchial)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Muc5b (mucin 5B, oligomeric mucus/gel-forming)
Pan paniscus (bonobo/pygmy chimpanzee) : MUC5B (mucin 5B, oligomeric mucus/gel-forming)
Canis lupus familiaris (dog) : MUC5B (mucin 5B, oligomeric mucus/gel-forming)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Muc5b (mucin 5B, oligomeric mucus/gel-forming)
Sus scrofa (pig) : MUC5B (mucin 5B, oligomeric mucus/gel-forming)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01214,778,459 - 214,811,237 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01221,691,881 - 221,724,641 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41201,962,340 - 201,997,147 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1194,545,288 - 194,577,247 (+)NCBICelera
Cytogenetic Map1q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Muc5b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1561983
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.