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Gene: Taf1 (TATA-box binding protein associated factor 1) Rattus norvegicus
Symbol: Taf1
Name: TATA-box binding protein associated factor 1
CRRD ID: 1562050
Description: Predicted to contribute to H3K27me3 modified histone binding activity. Involved in response to drug. Localizes to nucleus. Predicted to colocalize with nucleolus. Human ortholog(s) of this gene implicated in X-linked dystonia-parkinsonism and syndromic X-linked intellectual disability. Orthologous to human TAF1 (TATA-box binding protein associated factor 1); PARTICIPATES IN histone modification pathway; RNA polymerase II transcription initiation pathway; INTERACTS WITH 1,3-dinitrobenzene; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
Also known as: LOC317256; RGD1562050; similar to CCG1; TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor; transcription initiation factor TFIID subunit 1
Homo sapiens (human) : TAF1 (TATA-box binding protein associated factor 1)  HGNC  Alliance
Mus musculus (house mouse) : Taf1 (TATA-box binding protein associated factor 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Taf1 (TATA-box binding protein associated factor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TAF1 (TATA-box binding protein associated factor 1)
Canis lupus familiaris (dog) : TAF1 (TATA-box binding protein associated factor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Taf1 (TATA-box binding protein associated factor 1)
Sus scrofa (pig) : TAF1 (TATA-box binding protein associated factor 1)
Chlorocebus sabaeus (African green monkey) : TAF1 (TATA-box binding protein associated factor 1)
Heterocephalus glaber (naked mole-rat) : Taf1 (TATA-box binding protein associated factor 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0X71,412,291 - 71,486,456 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX71,412,289 - 71,485,085 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X72,261,626 - 72,335,791 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X89,590,556 - 89,666,569 (+)NCBIRGSC3.4rn4RGSC3.4
CeleraX66,996,430 - 67,071,877 (+)NCBICelera
Cytogenetic MapXq22NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Taf1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1562050
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.