Gene: Rfx4 (regulatory factor X4) Rattus norvegicus
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Symbol: Rfx4
Name: regulatory factor X4
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific, RNA polymerase II proximal promoter sequence-specific DNA binding activity, and chromatin binding activity; predicted to be involved in animal organ development, cilium assembly, and regulation of gene expression; predicted to localize to the nucleus; orthologous to human RFX4 (regulatory factor X4); INTERACTS WITH 1,3-dinitrobenzene; bisphenol A; decabromodiphenyl ether.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC500818; LOW QUALITY PROTEIN: transcription factor RFX4; regulatory factor X, 4 (influences HLA class II expression); RGD1562092; similar to regulatory factor X 4 variant; transcription factor RFX4
Orthologs:
Homo sapiens (human) : RFX4 (regulatory factor X4)  HGNC  Alliance
Mus musculus (house mouse) : Rfx4 (regulatory factor X, 4 (influences HLA class II expression))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rfx4 (regulatory factor X4)
Pan paniscus (bonobo/pygmy chimpanzee) : RFX4 (regulatory factor X4)
Canis lupus familiaris (dog) : RFX4 (regulatory factor X4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rfx4 (regulatory factor X4)
Sus scrofa (pig) : RFX4 (regulatory factor X4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0725,831,358 - 25,909,976 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0725,966,111 - 26,038,982 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4720,976,369 - 21,052,088 (-)NCBIRGSC3.4rn4RGSC3.4
Celera716,067,975 - 16,205,907 (-)NCBICelera
Cytogenetic Map7q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Rfx4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1562092
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.