Gene: RGD1562136 (similar to D1Ertd622e protein) Rattus norvegicus
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Symbol: RGD1562136
Name: similar to D1Ertd622e protein
Description: Predicted to be involved in negative regulation of cytokine production involved in inflammatory response and negative regulation of fibroblast migration; predicted to localize to the ciliary transition zone and cytoplasm; orthologous to human C5orf30 (chromosome 5 open reading frame 30); INTERACTS WITH acrylamide; atrazine; bisphenol A.
Type: protein-coding
RefSeq Status: PREDICTED
Also known as: hypothetical protein LOC501195; LOC501195; UNC119-binding protein C5orf30 homolog; uncharacterized protein LOC501195
Orthologs:
Homo sapiens (human) : C5orf30 (chromosome 5 open reading frame 30)  HGNC  Alliance
Mus musculus (house mouse) : D1Ertd622e (DNA segment, Chr 1, ERATO Doi 622, expressed)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102025243 (chromosome unknown open reading frame, human C5orf30)
Pan paniscus (bonobo/pygmy chimpanzee) : C5H5orf30 (chromosome 5 C5orf30 homolog)
Canis lupus familiaris (dog) : C3H5orf30 (chromosome 3 C5orf30 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH5orf30 (chromosome unknown C5orf30 homolog)
Sus scrofa (pig) : C2H5orf30 (chromosome 2 C5orf30 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.09111,327,333 - 111,347,428 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.09110,878,815 - 110,898,589 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4997,216,277 - 97,236,238 (+)NCBIRGSC3.4rn4RGSC3.4
Celera995,862,440 - 95,882,884 (+)NCBICelera
Cytogenetic Map9q37NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on RGD1562136
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1562136
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.