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Gene: Ofd1 (OFD1, centriole and centriolar satellite protein) Rattus norvegicus
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Symbol: Ofd1
Name: OFD1, centriole and centriolar satellite protein
CRRD ID: 1562231
Description: Predicted to have alpha-tubulin binding activity; gamma-tubulin binding activity; and identical protein binding activity. Involved in cilium assembly. Predicted to localize to microtubule organizing center and motile cilium. Biomarker of retinal degeneration. Human ortholog(s) of this gene implicated in Joubert syndrome 10; Simpson-Golabi-Behmel syndrome type 2; orofaciodigital syndrome I; retinitis pigmentosa; and retinitis pigmentosa 23. Orthologous to human OFD1 (OFD1 centriole and centriolar satellite protein); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC302661; oral-facial-digital syndrome 1; oral-facial-digital syndrome 1 gene homolog; oral-facial-digital syndrome 1 gene homolog (human); RGD1562231; similar to Ofd1 protein
Orthologs:
Homo sapiens (human) : OFD1 (OFD1 centriole and centriolar satellite protein)  HGNC  Alliance
Mus musculus (house mouse) : Ofd1 (OFD1, centriole and centriolar satellite protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ofd1 (OFD1 centriole and centriolar satellite protein)
Pan paniscus (bonobo/pygmy chimpanzee) : OFD1 (OFD1 centriole and centriolar satellite protein)
Canis lupus familiaris (dog) : OFD1 (OFD1 centriole and centriolar satellite protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ofd1 (OFD1 centriole and centriolar satellite protein)
Sus scrofa (pig) : OFD1 (OFD1 centriole and centriolar satellite protein)
Chlorocebus sabaeus (African green monkey) : OFD1 (OFD1 centriole and centriolar satellite protein)
Heterocephalus glaber (naked mole-rat) : Ofd1 (OFD1 centriole and centriolar satellite protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X29,562,165 - 29,602,934 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX29,562,165 - 29,602,925 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X29,955,456 - 29,996,224 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X48,701,675 - 48,742,443 (+)NCBIRGSC3.4rn4RGSC3.4
CeleraX28,388,104 - 28,428,825 (+)NCBICelera
Cytogenetic MapXq13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ofd1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1562231
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-09-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.