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Gene: Hoxb5 (homeo box B5) Rattus norvegicus
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Symbol: Hoxb5
Name: homeo box B5
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II distal enhancer sequence-specific DNA binding activity. Predicted to be involved in several processes, including embryonic skeletal system morphogenesis; endothelial cell differentiation; and positive regulation of transcription by RNA polymerase II. Predicted to localize to the cytosol and fibrillar center. Orthologous to human HOXB5 (homeobox B5); INTERACTS WITH 1-naphthyl isothiocyanate; 17beta-estradiol; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: homeobox protein Hox-B5; LOC497987; RGD1562292; similar to homeotic protein Hox B5 - mouse
Orthologs:
Homo sapiens (human) : HOXB5 (homeobox B5)  HGNC  Alliance
Mus musculus (house mouse) : Hoxb5 (homeobox B5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxb5 (homeobox B5)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXB5 (homeobox B5)
Canis lupus familiaris (dog) : HOXB5 (homeobox B5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxb5 (homeobox B5)
Sus scrofa (pig) : HOXB5 (homeobox B5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01084,152,152 - 84,154,360 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01083,954,884 - 83,957,092 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41085,035,516 - 85,037,724 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1080,035,535 - 80,037,743 (+)NCBICelera
Cytogenetic Map10q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Hoxb5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

CRRD Object Information
CRRD ID: 1562292
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-06-11
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.